A0A9Q1L3R0 · A0A9Q1L3R0_9SOLA

  • Protein
    RRM domain-containing protein
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    2/5

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcommitment complex
Cellular Componentnuclear speck
Cellular ComponentU2-type prespliceosome
Cellular ComponentU2AF complex
Molecular Functionpoly-pyrimidine tract binding
Molecular Functionpre-mRNA 3'-splice site binding
Biological ProcessmRNA processing
Biological ProcessRNA splicing

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    RRM domain-containing protein

Gene names

    • ORF names
      K7X08_015444

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • cv. KIB-2019
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > asterids > lamiids > Solanales > Solanaceae > Solanoideae > Hyoscyameae > Anisodus

Accessions

  • Primary accession
    A0A9Q1L3R0

Proteomes

Subcellular Location

Keywords

  • Cellular component

PTM/Processing

Features

Showing features for signal, chain.

TypeIDPosition(s)Description
Signal1-31
ChainPRO_504029161732-663RRM domain-containing protein

Family & Domains

Features

Showing features for compositional bias, region, domain.

TypeIDPosition(s)Description
Compositional bias59-79Polar residues
Region59-264Disordered
Compositional bias83-234Basic and acidic residues
Compositional bias235-257Basic residues
Domain329-412RRM
Domain449-527RRM
Domain562-654RRM

Sequence similarities

Belongs to the splicing factor SR family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    663
  • Mass (Da)
    74,341
  • Last updated
    2023-09-13 v1
  • Checksum
    AAABCBFD449FDBD6
MAHFIKRRSFWSHNRIVYLVFFFLHFTFTNPTPIAEQFSGSSCRSTSSRWPVFYFKSSMDSSENGCTQLTPSHTGGENEITGVDNGEEEHDSRKRRSSSKHSSRDYEGERESSRSRERDKGRDKDRDRSRDKERDREKDHDRRHRDQSEKRRTRDRDDDANISDDGTGSREYWQKDYDRDRDERRRHRSKSYEREREEGHRHRSKSYDKDREEKDRHRSKSFDKDREERHGHRSHSRGRSSHTSRSRSRSRSRSRSKSKRISGFDMAPPTFALLAGVPAVAASAGQLPGTAPAIPGMFPDMFPLASGPLGAIPVVPVQAMTQQATRHARRVYVGGLPPTANEQSVATYFNHVMLAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRPTDYNPSLAATLGPSQPNPNLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFNLVKDKETGNSKGYAFCVYSDVSVTDIACAALNGIKMGDKTLTVRRASQGTLQPKPEQESILMHAQQQIALQRLMLQPGGPPTKVLCLTNVVSPDELKDDEDYEDIMEDMRTECAKFGNLVNLVIPRPRPDGEPTPGVGKVFLEYADVESSSRAQQGLNGRKFGGNPVVAVFHAENKFSEGGYES

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias59-79Polar residues
Compositional bias83-234Basic and acidic residues
Compositional bias235-257Basic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JAJAGQ010000023
EMBL· GenBank· DDBJ
KAJ8527993.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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