A0A9D1HE00 · A0A9D1HE00_9FIRM

Function

function

Isomerase that catalyzes the conversion of deoxy-ribose 1-phosphate (dRib-1-P) and ribose 1-phosphate (Rib-1-P) to deoxy-ribose 5-phosphate (dRib-5-P) and ribose 5-phosphate (Rib-5-P), respectively.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Cofactor

Mn2+ (UniProtKB | Rhea| CHEBI:29035 )

Note: Binds 2 manganese ions.

Pathway

Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 1/2.

Features

Showing features for binding site.

TypeIDPosition(s)Description
Binding site14Mn2+ 1 (UniProtKB | ChEBI)
Binding site289Mn2+ 2 (UniProtKB | ChEBI)
Binding site294Mn2+ 2 (UniProtKB | ChEBI)
Binding site330Mn2+ 1 (UniProtKB | ChEBI)
Binding site331Mn2+ 1 (UniProtKB | ChEBI)
Binding site342Mn2+ 2 (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular Componentcytosol
Molecular Functionmagnesium ion binding
Molecular Functionmanganese ion binding
Molecular Functionphosphopentomutase activity
Biological Process2-deoxyribose 1-phosphate catabolic process
Biological Processcellular metabolic compound salvage
Biological Processnucleotide metabolic process

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Phosphopentomutase
  • EC number
  • Alternative names
    • Phosphodeoxyribomutase

Gene names

    • Name
      deoB
    • ORF names
      IAB63_00445

Organism names

Accessions

  • Primary accession
    A0A9D1HE00

Proteomes

Subcellular Location

Keywords

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain6-381Metalloenzyme

Sequence similarities

Belongs to the phosphopentomutase family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    397
  • Mass (Da)
    44,437
  • Last updated
    2023-05-03 v1
  • Checksum
    6E00B784EE2D8FAD
MSERFKRIFVIVIDSLGIGAMPDAADYGDEGADTLGHISEAADTFVIPHLQSLGLANLHPLKQVPPVERPLGYHMALREMSVSKDTMTGHWEMMGLNIRTPFRTFTEHGFPKELIEELERRTGHKVIGNKSASGTEIIEELGEEEIRTGHMIVYTSADSVLQICGNEETFGLDELYRCCEIARELTMKEEWKVGRVIARPYVGRKKGEFRRTANRHDYALKPFGRTALNALNDGGYDVLSVGKIQDIFQGEGITWAVRSKSSVEGMEQTIALTERDFHGLCYVNLVDFDALWGHRRNPKGYKEELERFDVRLGDLLEQLKDDDLLMITADHGTDPTYKGTDHTREKVPLLIYSPSMKQGGLLPEQETFAVIGATVADNFHVPMPEGTIGTSLLTLIG

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
DVLT01000002
EMBL· GenBank· DDBJ
HIU01705.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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