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A0A949QBJ8 · A0A949QBJ8_CHLSQ

  • Protein
    Transcription termination factor Rho
  • Gene
    rho
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.
The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Features

Showing features for binding site.

142950100150200250300350400
TypeIDPosition(s)Description
Binding site180-185ATP (UniProtKB | ChEBI)
Binding site192-197ATP (UniProtKB | ChEBI)
Binding site223ATP (UniProtKB | ChEBI)

GO annotations

AspectTerm
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular FunctionATP-dependent activity, acting on RNA
Molecular Functionhelicase activity
Molecular FunctionRNA binding
Biological ProcessDNA-templated transcription termination

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Transcription termination factor Rho
  • EC number
  • Alternative names
    • ATP-dependent helicase Rho

Gene names

    • Name
      rho
    • ORF names
      JZU70_01790

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • LaCa_MAG_11
  • Taxonomic lineage
    Bacteria > Chlorobiota > Chlorobiia > Chlorobiales > Chlorobiaceae > Chlorobium/Pelodictyon group > Chlorobium

Accessions

  • Primary accession
    A0A949QBJ8

Proteomes

Interaction

Subunit

Homohexamer. The homohexamer assembles into an open ring structure.

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain62-137Rho RNA-BD

Sequence similarities

Belongs to the Rho family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    429
  • Mass (Da)
    48,479
  • Last updated
    2023-02-22 v1
  • MD5 Checksum
    42E9B403EAD6BA4D57EF3CD2CFDC7EE3
MSNNSSFKGLDINMLQKKKVSELHVLAKELGVMAAGLRKEELIFKIIEAQSQKNTDSESGNVMVNTGVLQVIPEGYGFLRSANYNYLSSPDDIYVSPSQIKRFNMRTGDTVSGQVRAPKEGERFFALLKINTIDGNDPEITRERPYFENLTPLFPRERLKLETKQTEACGRIMDIFTPIGKGQRGLIVAQPKTGKTMLLQMIANAIIKNHPEVYLIVLLIDERPEEVTDMARSVPAEVVSSTFDEDPERHVLVADMVLEKAKRLVEVGRDVVVLLDSITRLARAHNTIIPHSGKILSGGIDANALTKPKRFFGAARNIEEGGSLTIIATALIDTGSRMDDVIFEEFKGTGNMELLLDRRLSERRVFPSIDILRSSTRKEELLFSQEELSRTWLLRKYLADKNPIECMEFMREKMADTKDNKEFFKYMNA

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JAFLKS010000024
EMBL· GenBank· DDBJ
MBV5302923.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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