A0A8T2H5P7 · A0A8T2H5P7_ARASU

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcatalytic step 2 spliceosome
Biological ProcessmRNA processing
Biological ProcessRNA splicing

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Pinin/SDK/MemA protein

Gene names

    • ORF names
      ISN44_As01g015580

Organism names

Accessions

  • Primary accession
    A0A8T2H5P7

Proteomes

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for compositional bias, region, domain, coiled coil.

Type
IDPosition(s)Description
Compositional bias18-36Basic and acidic residues
Region18-161Disordered
Compositional bias81-91Basic and acidic residues
Compositional bias127-139Basic and acidic residues
Domain160-288Pinin/SDK/MemA protein
Coiled coil190-217
Region350-384Disordered
Compositional bias368-384Acidic residues
Region397-423Disordered
Compositional bias399-423Basic and acidic residues

Sequence similarities

Belongs to the pinin family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    423
  • Mass (Da)
    48,939
  • Last updated
    2022-10-12 v1
  • MD5 Checksum
    DBA61B419D74AEAC79ADC18423B215A6
MGDTALEKTAEELRHEIDELHRQQREITERLRDPRGLRRGGFSNVAPRNQGRRGFPRPAERNDVEDEPPAKRRLSSAVVKVDGEDVSKDGEFPVDGNGTQVKVGENGTSDQSDKKQSGFHRGSWSQRDAEQRRTNKRYEAFALPEPAPRVLPKNEDPKLVNRNRRMLGNLLGTLEKFRKEDKQRSGTDAYARRTAALQRAEEKAREESERLRLQERENLTEKRRRDLTLRARVAAKAEQKKLELLFLQWSEHQKKLSNFIRTKAEPRIYYAPVKPLEEDTSEVEQQKERTFLEWKAARRQEVSEYQKEIEEQCLGNVEKELERWQNARKARKANNEGMNLQETMDKELETHRMEHGPKKRKIPGGGVGDEDEEDEVEDINGGEDEMIMDDLLEEGGDGTIKEEVATDTVKAEAVEEDIKHEVL

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias18-36Basic and acidic residues
Compositional bias81-91Basic and acidic residues
Compositional bias127-139Basic and acidic residues
Compositional bias368-384Acidic residues
Compositional bias399-423Basic and acidic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JAEFBJ010000001
EMBL· GenBank· DDBJ
KAG7654372.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Notice.
Help