A0A8T1R6R6 · A0A8T1R6R6_CARIL
- ProteinATP-dependent RNA helicase
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids573 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
function
RNA helicase.
Catalytic activity
- ATP + H2O = ADP + H+ + phosphate
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | membrane | |
Cellular Component | nucleus | |
Molecular Function | ATP binding | |
Molecular Function | helicase activity | |
Molecular Function | hydrolase activity | |
Molecular Function | RNA binding | |
Biological Process | ribosome biogenesis |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameATP-dependent RNA helicase
- EC number
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Fagales > Juglandaceae > Carya
Accessions
- Primary accessionA0A8T1R6R6
Proteomes
Subcellular Location
UniProt Annotation
GO Annotation
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transmembrane | 39-57 | Helical | ||||
Sequence: KRFQLLSLAVMYLLMLLLE |
Keywords
- Cellular component
Structure
Family & Domains
Features
Showing features for region, domain, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-25 | Disordered | ||||
Sequence: MKARYSRRALSPALASTPPYATSSE | ||||||
Domain | 87-224 | Helicase ATP-binding | ||||
Sequence: VCEILQKLLHRFHWIVPGYIMGGENRSKEKARLRKGISVLVATPGRLLDHLRHTSSFLHANLRWIIFDEADRILELGFGKEIEEILDILGSRQDASVDEEIAESYISEHPRQNVLLSATLNEKVNHLAKISLENPVMI | ||||||
Domain | 290-459 | Helicase C-terminal | ||||
Sequence: ILKDLLERGTSQKIVVFFSTCDAVDFHHSLLSEFKFSPHPQPEEQLRQMFVGCKTLRLHGNMKQDDRRTTFQAFKTEKLALLLSTDVAARGLDFPKVRFIIQYDSPGEATEYVHRVGRTARLGERGDSLLFLQPVEMDYLQDLEKHGISLTEYPLLKVLDSFPLYNEKRH | ||||||
Region | 540-573 | Disordered | ||||
Sequence: KSFQKETKKRKRDEKQKGLSKKRKFSRKTLQQKI | ||||||
Compositional bias | 553-573 | Basic residues | ||||
Sequence: EKQKGLSKKRKFSRKTLQQKI |
Domain
The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.
Sequence similarities
Belongs to the DEAD box helicase family. DDX31/DBP7 subfamily.
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length573
- Mass (Da)65,888
- Last updated2022-10-12 v1
- Checksum3B70C55F1B9A44AF
Computationally mapped potential isoform sequences
There are 2 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A8T1R6T5 | A0A8T1R6T5_CARIL | CIPAW_03G202900 | 607 | ||
A0A8T1R645 | A0A8T1R645_CARIL | CIPAW_03G202900 | 489 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 553-573 | Basic residues | ||||
Sequence: EKQKGLSKKRKFSRKTLQQKI |
Keywords
- Technical term