A0A8M9PNA9 · A0A8M9PNA9_DANRE

Function

Catalytic activity

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentchromatin
Cellular Componentnucleus
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular FunctionATP-dependent chromatin remodeler activity
Molecular Functionchromatin binding
Molecular FunctionDNA binding
Molecular Functionhistone binding
Biological Processchromatin remodeling
Biological Processregulation of gene expression

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA helicase
  • EC number

Gene names

    • Name
      chd6

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    A0A8M9PNA9

Proteomes

Organism-specific databases

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for compositional bias, region, domain.

TypeIDPosition(s)Description
Compositional bias1-23Basic and acidic residues
Region1-257Disordered
Compositional bias30-54Polar residues
Compositional bias115-177Basic and acidic residues
Compositional bias192-221Basic and acidic residues
Compositional bias225-241Polar residues
Compositional bias242-257Basic and acidic residues
Domain305-369Chromo
Domain389-455Chromo
Domain487-661Helicase ATP-binding
Domain801-970Helicase C-terminal
Region1184-1203Disordered
Region1337-1368Disordered
Compositional bias1349-1368Basic and acidic residues
Region1674-1727Disordered
Compositional bias1687-1711Polar residues
Region1851-1886Disordered
Compositional bias1869-1886Polar residues
Region1905-2039Disordered
Compositional bias1961-1986Basic and acidic residues
Compositional bias1995-2039Basic and acidic residues
Region2446-2498Disordered
Region2621-2651Disordered
Compositional bias2630-2644Basic and acidic residues
Compositional bias2763-2786Polar residues
Region2763-2823Disordered
Compositional bias2800-2823Polar residues
Region2859-2951Disordered
Compositional bias2866-2880Basic and acidic residues
Compositional bias2894-2918Basic and acidic residues
Compositional bias2932-2951Basic and acidic residues

Sequence similarities

Belongs to the SNF2/RAD54 helicase family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    2,951
  • Mass (Da)
    331,116
  • Last updated
    2022-08-03 v1
  • Checksum
    38396C69B5933888
MSGAGVSRRRHKEQEKMKIQKKDKQMSASYVLKHTPSAAASNASDQNAQTTFPIGHLGKEQLRIIGGPPNHCMAHPKHSGPAVSSHSLRPSMINNEEDDGGGGTKVKKKRRKKDKKESEWHEDGQSNAKPKRREQKEGKEILPRKTKTAKEQKDHKKRDAKAQKEVKKVKKGQDVKVKTLAKNQCATHTPSKRGRKPKEQGAMPPEKKKKGKRKSDAVLEMVESDDTASLSTLATGGEESTDPMDNTKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGSGRIAAMSSSTLAWQAEEPPEDEANIIEKILSVRTVNKEMAPDEPPEEMEEFYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEVDRVLEIAITTDTETGEEVTHYLVKWCSLSYEESTWELQEDVDPVKIKEFEELKKVPEMKHVERPLPEQWQKLEKSRDYRNGNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLYEIFLMGLRGPFLIIAPLSTITNWEREFRTWTEMNVIVYHGSQISRQMILQYEMYHRDEQGNIMSGEFKFQGVITTFEMIMADCPELKKINWRCVVIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETTFLEEFGDLKTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLAKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFRKTYSSDAADFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFSKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSSGNRTDISLDDPNFWQKWAKIAELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEERPCRTRRLSDRNRRYLRAECFRVEKNLLIFGWGRWKDILNHGRFKWHLAERDMEVLCRALLVYCVRHYKGDDKIKSFIWDLITPTEDGHNQALQNHSGLSAPVPRGRKGKKLKNQLSPPELKNADWLAHCNPEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKVEVLGDAATQALEGIPSSKLEVTLPDIDYIEIPTIWWDAEADKSLLIGVHKHGYERYNAMRADPALCFLERVGMPDVTALTVEQSGAETPSDAPDGISKSDEIKEENHVKSEELEEKVEIKEEPMSDETAKNDNMVTGCFVASLAGDLTAELMEQGRIQWPAGSALTARLRRLITAYQRYTRREPLRHDFLLHEGIAPVAWQIGEFRHCTTEPDPLFLEWQRRWTRREQADFYRTVSSFGVVYDPEKKNFDWSQFRALARLERKTDESLERYFHSFVSMCRTACRLPPRKDEGNVDPSLFVDPITEERAARTLYRIELLRKVREQVLRHPLLGARLQLCRPSLYLPVWWECGKHDRDLLIGVAKHGLSRTDFYILNDPQLSFLEAHRNYVHKENHRYPVPGLPHHHCCLYDANIGHCQSPQPPEYHPTPAHHTPTQLVHTHGHHQSSEASEPGSSLGIGSGNREGFLDCPPLDDSLELGSLQHEGLTSDTLHGKSGKEAFNGFPFNSATGGQNMLNSYGVQGELNGTQGDMADSIAGKLRSDVLVGEQGSSEETGLMAPSVELDELQTPWESSDHAETSDMFNEADPILGAQALEPSFLDAPQPDDGQEGDETLTDCLSMPSSDSQSNPVEPLAPSFMLFKDLNVGETSVDQTDLSASLPEYVPPPPLGLPDVSLDQADPLNEEQEDKLSDSNITPCVPSPEEEAESMGFNFEKEDLSPDSQKTKDTQDDMPSIESPSENCLDESQKEDCKVPFDDSIERDLKDPCEMALEEPYEKPLREPEKVPLEESYDLTCDETLQEPCDGFQQDAVEQQLMEKPSGETCKEPSDSIENCNLTNTTLSADYPLPPSLPSSPTTLPDTSVSPVLDVVPKQEFLMDPMVSEVKPEPDSTTQTPHLEQTEALEIKDKIKDESAKTPVLLGDVDSPRFALPICEMADSVHEIREPTIAQLLQEKALFSFSEWPKDRVIINRIDSICHTILKGKWPSSSQQFESPTSLANTCVPSSAHQRAGFLPNRMPISQSLNFNLSHTVPHIQKQERLVTPTFIPELKRPRRGFEFEAEVLAKPSHLGDKIQVGVSHRANALLINGWQDAAIDLSKPAELTVGGDSGPIGHMSHTVQSAAHKITGIGSIQGSLGLDMAGILQAGLIHPVTGQIVNGSLRRDDSMLRRRRGRRRNVETADLSFIKGRSINLPEQQSGAESISHPVVSSTSSQSECPPATPTTLSSHSATPSPAAAAATETLSASVDRETANKGLMEWLRQNPNYNMELSAFPASQNAGMLHSFLDRPKQRRHRCKDPSKLDVNSLTGEERVPVVHRNTGRRLGGAMAPAIKELSRWLDANSEYSVAPDWADVVKHSGFLPEGKFTRILSGPVSRDPGPRRRGRRPRTEMPKAPELPAGMGSLFMNGGLIGSMDLVSLPNLRNVPGIPLTGIMGFPHGFATAVSSDDAKNGLSMLPMMLHGMATVQPPMYSAHMSGMISQPMSTATSTMSTVTASSTTASVTLTNSATVTSTSVDSSDTAPPQDNASSPVSSEKGNKEDAKQGGEDKKTSASVSTAAATSSSNSSSITSTGSHLTFNPFLIPGMSHSLLYPHMFLPPGSIMALPAMPAADSTGSPKRKRKKVREEGLVEGSGILGTQIDGEESKGVKDEQTPELKSQEARVEENGPDVDLAPTNLIKAPSEDKRTEENEKTEQDAQGD

Computationally mapped potential isoform sequences

There are 4 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A8N7T870A0A8N7T870_DANREchd62953
X1WCW5X1WCW5_DANREchd62935
A0A8M3ATN8A0A8M3ATN8_DANREchd62949
A0A8M3BAM2A0A8M3BAM2_DANREchd62952

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-23Basic and acidic residues
Compositional bias30-54Polar residues
Compositional bias115-177Basic and acidic residues
Compositional bias192-221Basic and acidic residues
Compositional bias225-241Polar residues
Compositional bias242-257Basic and acidic residues
Compositional bias1349-1368Basic and acidic residues
Compositional bias1687-1711Polar residues
Compositional bias1869-1886Polar residues
Compositional bias1961-1986Basic and acidic residues
Compositional bias1995-2039Basic and acidic residues
Compositional bias2630-2644Basic and acidic residues
Compositional bias2763-2786Polar residues
Compositional bias2800-2823Polar residues
Compositional bias2866-2880Basic and acidic residues
Compositional bias2894-2918Basic and acidic residues
Compositional bias2932-2951Basic and acidic residues

Keywords

Sequence databases

Genome annotation databases

Similar Proteins

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