A0A8M9PGB2 · A0A8M9PGB2_DANRE

Function

Features

Showing features for dna binding.

1719100200300400500600700
TypeIDPosition(s)Description
DNA binding634-693Homeobox

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Molecular Functionsequence-specific DNA binding
Biological Processregeneration
Biological Processregulation of transcription by RNA polymerase II

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    POU domain protein

Gene names

    • Name
      pou6f2

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    A0A8M9PGB2

Proteomes

Organism-specific databases

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region22-84Disordered
Compositional bias59-84Polar residues
Region176-301Disordered
Compositional bias192-229Basic and acidic residues
Compositional bias230-251Polar residues
Compositional bias252-272Pro residues
Compositional bias273-289Polar residues
Region437-501Disordered
Domain503-613POU-specific
Domain632-692Homeobox
Region700-719Disordered

Sequence similarities

Belongs to the POU transcription factor family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    719
  • Mass (Da)
    77,856
  • Last updated
    2022-08-03 v1
  • Checksum
    69A808439B8ADCCB
MITGQLSKPLLPLRADMDACELRDDDKAASPDSELNEEPLLLSADTDSEEKMYGGRVGSVQSDASSSPTEHGHMGQSHPTYPVGPQSLLVAQQLASAVSGVMSGGAPGLNQPILIPFNAGGHLGGQQGLVLSLPTAANIQGLVAAAAAGGIMALPLQNLQATSSLNSQLQHLQQLQQLQHHQQQQHHHHQQQQQQQQREREREREREREQREREQRERDQQREREQHQQLCGQAHLQPPSHHQLTPPIQSQVSGPSPGPVPTCPPSNHSSAQPPQSPPSHRQNQSPARSLPSPVTPPLPLQGNAFHLLRQRESEGERKRECLPSDRLNPLASQAAVAAAAAMGSIAGSQVFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNSVGPSNQSGGGTSPLQVQPITPQLLTNAQGQIIATVIGNQILPVINTQGITLSPIKPGQQLPQTGQTPQAPPVSQPNLLRMPHSQSPLRQASSSSSTSSSSSSALSVGQLVSNPQTAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILRSHFFLPQEAQENTIASSLTGKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPEGLVPGAPMDPLVDNMEEHQ

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
A0A0R4J6S2A0A0R4J6S2_DANREpou6f2694

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias59-84Polar residues
Compositional bias192-229Basic and acidic residues
Compositional bias230-251Polar residues
Compositional bias252-272Pro residues
Compositional bias273-289Polar residues

Keywords

Sequence databases

Similar Proteins

Disclaimer

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