A0A8M6YSU9 · A0A8M6YSU9_DANRE

Function

Features

Showing features for dna binding.

169150100150200250300350400450500550600650
TypeIDPosition(s)Description
DNA binding419-478Homeobox

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Biological Processregulation of transcription by RNA polymerase II

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    POU domain protein

Gene names

    • Name
      pou2f2a

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    A0A8M6YSU9

Proteomes

Organism-specific databases

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for region, compositional bias, domain.

Type
IDPosition(s)Description
Region55-89Disordered
Compositional bias60-89Polar residues
Compositional bias171-198Polar residues
Region171-216Disordered
Compositional bias199-215Pro residues
Domain310-384POU-specific
Region398-424Disordered
Domain417-477Homeobox
Region475-567Disordered
Compositional bias483-497Pro residues
Compositional bias505-538Polar residues
Compositional bias539-554Pro residues
Compositional bias659-679Polar residues
Region659-691Disordered

Sequence similarities

Belongs to the POU transcription factor family. Class-2 subfamily.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    691
  • Mass (Da)
    73,431
  • Last updated
    2022-08-03 v1
  • Checksum
    5F1642E0E0202540
MFVPLPVPFVLPRTASDLHAWRLKSPLALRSHSGENSYGRLLDYIRMSKPVEVENPAADSPMESTDSERNGSDSNNQVQPMKINPFSISPTLSSSIKAKVEDCGEMSPTTATPAQTALTHTQLMLTGGQLAGLTALLPAQQQLLLQQAQLLAAAVQQSHVAHAANQQQAQQQAQQQANQQAAQQQSQGQSQSTQEQAAAAPVPPPPPPPPHQLPLSQPIQLTAQDIQQLLQLQQLVLVPGHTLPSPAQFLLPQTQQGQQGLLSTPNLIPLPQQNQGSLLAAPPRLSLQAQREKIAESSLNTVTTVTSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLTDAAFFNVYSETMSMDSTLPSPSSLSSPSLGFEGLPGRRRKKRTSIETNVRVALEHSFLANQKPTSEEILLISEKLNMEKEVIRVWFCNRRQKEKRINPSSATPPLPSQPQPTSHKPPCYSPHMMSSQGPRQTVGSLSTAVTTMSSVCPMTPSGPSLSSTPSPVTPPPRGDSSPAPPTHSTLNLSTGNTVRGVNTGLNQALLGSNPLATIQALAASGGQLPISSLEGSSKVLIGGSGAQGAGLPSSLFLNHSSMLPLATGPGMGLGGSAVGKTSFPVTGGMSPSPCSSPASSYSSGEMLHSPHSIGGAKIE

Computationally mapped potential isoform sequences

There are 7 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A8M3AT79A0A8M3AT79_DANREpou2f2a712
A0A8M6YVD3A0A8M6YVD3_DANREpou2f2a702
A0A8M9P294A0A8M9P294_DANREpou2f2a676
A0A8M3AQD8A0A8M3AQD8_DANREpou2f2a705
A0A8M3B3B2A0A8M3B3B2_DANREpou2f2a687
A0A8M6Z1Z0A0A8M6Z1Z0_DANREpou2f2a691
A0A8M6Z1A5A0A8M6Z1A5_DANREpou2f2a601

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias60-89Polar residues
Compositional bias171-198Polar residues
Compositional bias199-215Pro residues
Compositional bias483-497Pro residues
Compositional bias505-538Polar residues
Compositional bias539-554Pro residues
Compositional bias659-679Polar residues

Keywords

Sequence databases

Genome annotation databases

Similar Proteins

Disclaimer

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