A0A8M3AWY8 · A0A8M3AWY8_DANRE

Function

function

Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII).

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA binding
Molecular Functiontranslation elongation factor activity
Biological Processtranscription elongation-coupled chromatin remodeling

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Transcription elongation factor spt6

Gene names

    • Name
      supt6h
    • Synonyms
      Spt6
      , wu:fj42h11

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    A0A8M3AWY8

Proteomes

Organism-specific databases

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for compositional bias, region, domain.

Type
IDPosition(s)Description
Compositional bias1-16Acidic residues
Region1-196Disordered
Compositional bias17-31Basic and acidic residues
Compositional bias55-71Acidic residues
Compositional bias72-95Basic and acidic residues
Compositional bias128-154Acidic residues
Compositional bias163-183Acidic residues
Region219-248Disordered
Compositional bias224-238Acidic residues
Region482-512Disordered
Compositional bias487-502Acidic residues
Domain1220-1275S1 motif
Domain1318-1428SH2
Compositional bias1613-1669Polar residues
Region1613-1728Disordered
Compositional bias1680-1696Basic and acidic residues

Sequence similarities

Belongs to the SPT6 family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,728
  • Mass (Da)
    198,452
  • Last updated
    2022-08-03 v1
  • MD5 Checksum
    60BC0D3C622FB135E18E4BB5075458A3
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEEDEEEEEENTEDQDEHGNLRGLIDDDDVEEEEEEERGEPPAGEDSDSGEEVRHRRRKRSFDDYLDDDDLDLIEENLGVKVKRRKKKYSRVKTMDDEGDDDDEKDLIADEIFTGDGDGEGEVEDGEAVDTLHPRDDEEEEDDEESDIDDFIVDDDGQPITKKKGKKFSGYTDAALQEAQEIFGGDFDFAEFDTEAYDHAEEEEEDQDDESWDRPKKQTKRRVSRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDDELEEEAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADPDKPLADSTRPLDTADMERLKDVQSIDELGDVYNHFLLYYGRDIPKMQNAAKGGKKKLKKIKEVSEEDGEEAEVEEEEEEEEQKGPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFNTPEAVLEGARYMVAMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKERDVDEAHFAYSFKYLKNKPVKELSGDQFLKMCLAEEEGLLAIDICIDLVGVKGYGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNKLIAEAKDNIVKSCCKKLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDTPVFCSLINGEGEVVDFLRLPYFLKRRNAWREDEREKKQQDVENLKKFLLSKKPHVVAVSGENRDAHMVMEDIKRTISELEQNSSLPVVGVELVDNELAVLYMNSKKSEADFRDYPPLLRQAVSVARKIQDPLVEFAQVCSTDDDILCLKLHPLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYTQSLVQYICGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKETPETFYIGKLITCVVTNIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRTRLDNAVMGFIPTKFLSDKVVKHPEERVKPGMTVHCRIMKIDIEKFNVDLTCRTSDLSDKNNEWKLPKDTYYDFDAETDDVKQEEEQKKKQQRTTYIKRVIAHPSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFSLGHTLWINTEEFEDLDEITARYVQPMAAFARDLLGHKYFHECNGGDRKKMEELLVRTKKEKPTFIPYYISACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWFKDHYQDPVPGVTPASSRTRTPASVNATPANINIADLTRAVNSLPRNMTSQMFNAIAAVTGQGQNPNTTPAQWASSQYGYSGGSSAGGGGGSSSAYHVFATPQQPMATPLMTPSYSYTTPGQQQAMTTPQYPSSTPQSSHGHHQHSSSTPSSSSSRVRTPQPKASSHTAVDWGKMAEQWLQEKEAERRKQKTPRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
Q8UVK2SPT6H_DANREsupt6h1726

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-16Acidic residues
Compositional bias17-31Basic and acidic residues
Compositional bias55-71Acidic residues
Compositional bias72-95Basic and acidic residues
Compositional bias128-154Acidic residues
Compositional bias163-183Acidic residues
Compositional bias224-238Acidic residues
Compositional bias487-502Acidic residues
Compositional bias1613-1669Polar residues
Compositional bias1680-1696Basic and acidic residues

Keywords

Sequence databases

Genome annotation databases

Similar Proteins

Disclaimer

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