A0A8M2B4D0 · A0A8M2B4D0_DANRE

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular Functionprotein dimerization activity
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Biological Processregulation of transcription by RNA polymerase II

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Upstream stimulatory factor 1

Gene names

    • Name
      usf1
    • Synonyms
      zgc:56547

Organism names

  • Taxonomic identifier
  • Strain
    • Tuebingen
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    A0A8M2B4D0
  • Secondary accessions
    • A0A0R4IXK2

Proteomes

Organism-specific databases

Subcellular Location

Nucleus

Expression

Gene expression databases

Family & Domains

Features

Showing features for compositional bias, region, domain, coiled coil.

Type
IDPosition(s)Description
Compositional bias162-179Polar residues
Region162-199Disordered
Compositional bias180-199Basic and acidic residues
Domain188-243BHLH
Coiled coil240-284

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    299
  • Mass (Da)
    32,479
  • Last updated
    2022-08-03 v1
  • Checksum
    9A6320D769566328
MKGQPKSSEPDVSVPVIEEGAVATAEDPSAITTIQSASTFSTDQPIKYLFKTEGAGGQVTYRVIQVADGQLEAQPDGTTAVSVVTGFPATTQPVTQAVFSQSEGLEGDGTETHYTYYPATISDATAGTMVTGVQASDALLSQSASAGQLYVMMSPQEVLTGANQRSIAPRTQAYNAKSEGPRTSRDEKRRAQHNEVERRRRDKINNWIVQLSKTIPDCTIDSTKTGQSKGGILSKACDYIQELRQSNSRLGDELNSIERLRMDNQLLRQEVEDWKSKNQILRNQLRQHGIVAAASADPQ

Computationally mapped potential isoform sequences

There are 8 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
F1QUA1F1QUA1_DANREusf1309
A0A8M9Q076A0A8M9Q076_DANREusf1293
A0A8M2B3M5A0A8M2B3M5_DANREusf1288
A0A8M2B4B2A0A8M2B4B2_DANREusf1298
A0A8M3APR4A0A8M3APR4_DANREusf1307
A0A8M3B0Z9A0A8M3B0Z9_DANREusf1297
Q7ZWC6Q7ZWC6_DANREusf1309
A0A8M9QLB1A0A8M9QLB1_DANREusf1303

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias162-179Polar residues
Compositional bias180-199Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
BX663520
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

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