A0A8I6ACG3 · A0A8I6ACG3_RAT

  • Protein
    Target of myb1 membrane trafficking protein
  • Gene
    Tom1
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Evidence at protein level
  • Annotation score
    3/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentcytosol
Cellular Componentearly endosome
Cellular Componentendosome
Cellular Componentendosome membrane
Cellular Componentmembrane
Molecular Functionclathrin binding
Molecular Functionclathrin heavy chain binding
Molecular Functionmyosin VI binding
Molecular Functionphosphatidylinositol-5-phosphate binding
Molecular Functionpolyubiquitin modification-dependent protein binding
Molecular Functionubiquitin binding
Biological Processautophagosome-lysosome fusion
Biological Processendosomal transport
Biological Processpositive regulation of autophagosome maturation
Biological Processprotein transport
Biological Processregulation of endosome organization
Biological Processsignal transduction
Biological Processsubstrate localization to autophagosome

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Target of myb1 membrane trafficking protein

Gene names

    • Name
      Tom1

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • Brown Norway
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Rattus

Accessions

  • Primary accession
    A0A8I6ACG3

Proteomes

Organism-specific databases

PTM/Processing

Keywords

Family & Domains

Features

Showing features for domain, compositional bias, region.

TypeIDPosition(s)Description
Domain1-119VHS
Compositional bias134-160Polar residues
Region134-175Disordered
Domain182-270GAT
Region394-459Disordered
Compositional bias405-422Basic and acidic residues
Compositional bias444-459Basic and acidic residues

Sequence similarities

Belongs to the TOM1 family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    459
  • Mass (Da)
    50,483
  • Last updated
    2022-05-25 v1
  • Checksum
    4AF746152ACCAE0A
MEICDIINETEEGPKDAFRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVENVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRSSPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETPSRQNPVVSNSSHRGDLSQHATPLPTPAVLPGDSPITPTPEQIGKLRSELEMVNGNVRVMSEMLTELVPTQVEPADLELLQELNRTCRAMQQRILELIPRISNEQLTEELLMINDNLNNVFLRHERFERFRTGQTAKASGEAELAADLIDMGPDPAATSNLSSQLAGVDLGSSRVRAGLQSLEASGHLEDDFDMFALTRGSSLADQRKGVKYEAPQTTDGLAGALDARQQSTGAIPATQARIMEDIEQWLSTDVGSSAEEPSGVTSEEFDKFLEERAKAADRLPNLASPSAEGPPRPCPGAAPRRKTQEKDDDVLFAL

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
F7EYC4F7EYC4_RATTom1487

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias134-160Polar residues
Compositional bias405-422Basic and acidic residues
Compositional bias444-459Basic and acidic residues

Keywords

Sequence databases

Genome annotation databases

Similar Proteins

Disclaimer

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