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A0A7J8HD89 · A0A7J8HD89_MOLMO

Function

function

Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

AspectTerm
Cellular Componentprecatalytic spliceosome
Cellular ComponentU4/U6 x U5 tri-snRNP complex
Cellular ComponentU6 snRNP
Molecular FunctionRNA binding
Biological ProcessmRNA splicing, via spliceosome

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    U6 snRNA-associated Sm-like protein LSm8

Gene names

    • Name
      LSM8
    • ORF names
      HJG59_011704

Organism names

Accessions

  • Primary accession
    A0A7J8HD89

Proteomes

Subcellular Location

Keywords

Interaction

Subunit

LSm subunits form a heteromer with a doughnut shape.

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain1-76Sm

Sequence similarities

Belongs to the snRNP Sm proteins family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    96
  • Mass (Da)
    10,403
  • Last updated
    2021-04-07 v1
  • MD5 Checksum
    897F74829A1B9495A040456B1D44681D
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JACASF010000007
EMBL· GenBank· DDBJ
KAF6469895.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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