A0A6Q8PH77 · A0A6Q8PH77_HUMAN
- ProteinRNA binding protein fox-1 homolog 1
- GeneRBFOX1
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids374 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Function
function
RNA-binding protein that regulates alternative splicing events.
Features
Showing features for site.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Site | 118 | Interaction with RNA | ||||
Sequence: R | ||||||
Site | 126 | Interaction with RNA | ||||
Sequence: F | ||||||
Site | 127 | Interaction with RNA | ||||
Sequence: R | ||||||
Site | 151 | Interaction with RNA | ||||
Sequence: N | ||||||
Site | 156 | Interaction with RNA | ||||
Sequence: K | ||||||
Site | 160 | Interaction with RNA | ||||
Sequence: F | ||||||
Site | 184 | Interaction with RNA | ||||
Sequence: R | ||||||
Site | 194 | Interaction with RNA | ||||
Sequence: R |
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | RNA binding | |
Biological Process | mRNA processing | |
Biological Process | nervous system development | |
Biological Process | regulation of alternative mRNA splicing, via spliceosome | |
Biological Process | RNA splicing |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended nameRNA binding protein fox-1 homolog 1
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionA0A6Q8PH77
Proteomes
Organism-specific databases
Subcellular Location
Disease & Variants
Variants
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The viewer provides 521 variants from UniProt as well as other sources including ClinVar and dbSNP.
Organism-specific databases
Genetic variation databases
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-121 | Disordered | ||||
Sequence: MNCEREQLRGNQEAAAAPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHV | ||||||
Compositional bias | 55-119 | Polar residues | ||||
Sequence: QTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRL | ||||||
Domain | 117-193 | RRM | ||||
Sequence: KRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATA |
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length374
- Mass (Da)40,394
- Last updated2020-12-02 v1
- ChecksumF4FCA0CDB1FC9FD7
Computationally mapped potential isoform sequences
There are 18 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q9NWB1 | RFOX1_HUMAN | RBFOX1 | 397 | ||
A0A6Q8PFM4 | A0A6Q8PFM4_HUMAN | RBFOX1 | 415 | ||
A0A6Q8PGE0 | A0A6Q8PGE0_HUMAN | RBFOX1 | 354 | ||
A0A6Q8PHA3 | A0A6Q8PHA3_HUMAN | RBFOX1 | 351 | ||
F8VZG9 | F8VZG9_HUMAN | RBFOX1 | 466 | ||
F8VZY7 | F8VZY7_HUMAN | RBFOX1 | 263 | ||
A0A286YEU2 | A0A286YEU2_HUMAN | RBFOX1 | 582 | ||
A0A286YFF2 | A0A286YFF2_HUMAN | RBFOX1 | 201 | ||
H3BM62 | H3BM62_HUMAN | RBFOX1 | 74 | ||
F8VR27 | F8VR27_HUMAN | RBFOX1 | 262 | ||
F8VRS4 | F8VRS4_HUMAN | RBFOX1 | 391 | ||
B7Z1U7 | B7Z1U7_HUMAN | RBFOX1 | 425 | ||
A0A804HJM2 | A0A804HJM2_HUMAN | RBFOX1 | 376 | ||
A0A804HKG7 | A0A804HKG7_HUMAN | RBFOX1 | 349 | ||
A0A087X2B1 | A0A087X2B1_HUMAN | RBFOX1 | 375 | ||
I3L1D4 | I3L1D4_HUMAN | RBFOX1 | 372 | ||
A0A994J531 | A0A994J531_HUMAN | RBFOX1 | 377 | ||
F5H0M1 | F5H0M1_HUMAN | RBFOX1 | 380 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 55-119 | Polar residues | ||||
Sequence: QTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRL |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AC005347 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC005364 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC005563 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC005569 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC005737 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC012175 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC023822 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC074051 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
KF495794 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. |