A0A6M3TXL3 · A0A6M3TXL3_9MONO

Function

function

Forms the helical nucleocapsid (NC), protecting the genome from nucleases.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componenthelical viral capsid
Cellular Componenthost cell cytoplasm
Cellular Componentribonucleoprotein complex
Cellular Componentviral nucleocapsid
Molecular FunctionRNA binding
Molecular Functionstructural molecule activity

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Nucleocapsid
  • Alternative names
    • Nucleocapsid protein

Gene names

    • Name
      N

Organism names

  • Taxonomic identifier
  • Strain
    • ChamoisRV/IT2014
  • Taxonomic lineage
    Viruses > Riboviria > Orthornavirae > Negarnaviricota > Haploviricotina > Monjiviricetes > Mononegavirales > Paramyxoviridae > Feraresvirinae > Respirovirus

Accessions

  • Primary accession
    A0A6M3TXL3

Proteomes

Subcellular Location

Keywords

Interaction

Subunit

Homomultimer; forms the nucleocapsid. Binds to the viral genomic RNA. N0 interacts with the phosphoprotein (via N-terminus); this interaction allows P to chaperon N0 to avoid N polymerization before encapsidation. Interacts as N-RNA template with the phosphoprotein (via C-terminus); this interaction positions the polymerase on the template.

Family & Domains

Features

Showing features for compositional bias, region.

Type
IDPosition(s)Description
Compositional bias457-493Basic and acidic residues
Region457-515Disordered
Compositional bias494-503Polar residues

Sequence similarities

Belongs to the paramyxoviruses nucleocapsid family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    515
  • Mass (Da)
    57,336
  • Last updated
    2020-10-07 v1
  • MD5 Checksum
    EBF11F1F95B37548420C8DD428C8331F
MLSLFDTFSARRQENITKSAGGAVIPGQKSTVSIFVLGPSITDDNDKMAIALLFLSHSLDNEKQHAQRAGFLVSLLSMAYANPELYLTANGSNADVKYVIYMIEKDPGRQKYGGLIVKTREMVYEKTTDWMFGSDLDYDQDNMLQNGRGTANIEDLVHTFGYQSCLGALIIQVWIVLVKAITSISGLRKGFFTRLEAFRQDGTVKSSLVFSGEAVEQIGSIMRSQQSLVTLMVETLITMNTGRNDLTTIEKNIQIVGNYIRDAGLASFFNTIRYGVETRMAALTLSSLRPDINRLKALMELYLSKGPRAPFICILRDPIHGEFAPGNYPALWSYAMGVAVVQNKAMQQYVTGRSYLDIEMFQLGQAVARDAESQMSSTLEDELGVTQEAKQNLKKHIQRISNSDTTFQKPTGGSAIEMAIDEEAEQSEAPKDQDQSNEVPSSIIPYAWASEVDNRVQEESKARDSNIKAEQENIRDRLNRRLKEKRGRDESGSTDKVQNTNQAEIDDLLSAFGNN

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias457-493Basic and acidic residues
Compositional bias494-503Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
MT180123
EMBL· GenBank· DDBJ
QJE38107.1
EMBL· GenBank· DDBJ
Viral cRNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Notice.
Help