A0A6C0ZNF6 · A0A6C0ZNF6_TRSV
- ProteinRNA1 polyprotein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids2303 (go to sequence)
- Protein existencePredicted
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | host cell endoplasmic reticulum lumen | |
Cellular Component | host cell endoplasmic reticulum membrane | |
Cellular Component | membrane | |
Molecular Function | cysteine-type endopeptidase activity | |
Molecular Function | nucleotide binding | |
Molecular Function | RNA binding | |
Molecular Function | RNA helicase activity | |
Molecular Function | RNA-dependent RNA polymerase activity | |
Biological Process | DNA-templated transcription | |
Biological Process | proteolysis | |
Biological Process | viral RNA genome replication |
Keywords
- Molecular function
- Biological process
- Ligand
Names & Taxonomy
Protein names
- Recommended nameRNA1 polyprotein
- Alternative names
Organism names
- Strain
- Taxonomic lineageViruses > Riboviria > Orthornavirae > Pisuviricota > Pisoniviricetes > Picornavirales > Secoviridae > Comovirinae > Nepovirus > Nepovirus nicotianae
- Virus hosts
Accessions
- Primary accessionA0A6C0ZNF6
Subcellular Location
UniProt Annotation
GO Annotation
Host endoplasmic reticulum membrane ; Single-pass membrane protein
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transmembrane | 537-557 | Helical | ||||
Sequence: AVWSLLLILVGGLILLSERFL | ||||||
Transmembrane | 569-586 | Helical | ||||
Sequence: ILGIFLATFLGIFGYTFF | ||||||
Transmembrane | 639-660 | Helical | ||||
Sequence: FMGGLDIAIAAIGNVGASILGF | ||||||
Transmembrane | 1196-1218 | Helical | ||||
Sequence: VFPILMGFVCVVFACYGFIMPLL |
Keywords
- Cellular component
Structure
Family & Domains
Features
Showing features for domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 786-950 | SF3 helicase | ||||
Sequence: LEKIHTQSVRAGYFEGRRMEPFWVYIHGPSHCGKSLLMEPMSRELLRAGGFSESSIYTKNSCDKYWSRYRRQACVQIDDLSAGKTDPSLESQLINLVASKEVPLDMAEVEDKGILFDSAILVTSSNTAHVPTNANVNHAEAYKNRMNVVIQCRRKPEYSPVGVEL | ||||||
Domain | 1269-1483 | Peptidase C3 | ||||
Sequence: GASVEDAYAYEEMMVVLYVDSTVAPVVNAVRGPGRSIFMTRHQALMIPNNSTVVAHFSTRDVVEIHWEHDVIRKGEKKDTEIIQYRCPSIPELPSRCKKYFEYDLERDFPGPFTLDASCYRMQSPGKIDIELVSWTDHDAELRTRPLVIADPFGEDKYRREIPRYIQYGRPAQLHDCGAICVAKIGGQHRIVGLVISTDKHNTGGGLLPSALHMT | ||||||
Domain | 1763-1902 | RdRp catalytic | ||||
Sequence: SVAYNCDYSKFDGLMSCQVLDAIGKMVNKCYSNANPNLKKKGKGELPGSPPQLARHNLLMSIFGRKCLARSQVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVVYGDDNLIAVDPSMQKIF |
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length2,303
- Mass (Da)255,939
- Last updated2020-06-17 v1
- ChecksumB8673908B74A8157