A0A6C0ZMN2 · A0A6C0ZMN2_TRSV

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componenthost cell endoplasmic reticulum lumen
Cellular Componenthost cell endoplasmic reticulum membrane
Cellular Componentmembrane
Molecular Functioncysteine-type endopeptidase activity
Molecular Functionnucleotide binding
Molecular FunctionRNA binding
Molecular FunctionRNA helicase activity
Molecular FunctionRNA-dependent RNA polymerase activity
Biological ProcessDNA-templated transcription
Biological Processproteolysis
Biological Processviral RNA genome replication

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    RNA1 polyprotein
  • Alternative names
    • P1

Organism names

Accessions

  • Primary accession
    A0A6C0ZMN2

Subcellular Location

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane537-557Helical
Transmembrane569-586Helical
Transmembrane639-660Helical
Transmembrane1196-1218Helical

Keywords

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain786-950SF3 helicase
Domain1269-1483Peptidase C3
Domain1763-1902RdRp catalytic

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    2,303
  • Mass (Da)
    256,054
  • Last updated
    2020-06-17 v1
  • Checksum
    F3B3CBB649BF6CAC
MGFTCPIPDCLYSRSEWSNRALREEGLYFSMRCPGACCGAMLVRMQQEPEAADSATASRKRVDSATPKCLCWLASVGPSKCPKHSQVPLAPKSKSVPTKATVSASPLKKQHCDVVVTVGPPADLELVYPALVSKGSANPPKVGKKSFNEALLEKRAAYQARTAVPPPGPIRVVKTAATSVKVEKVKFPKGAVAFNGVNFIDAKGHVVLSAGALKILRGVQKLRRQQARSARRMAACRRVRLAAFAAKLPSLLRKADEATSGGFKYIDLNAPRVVRKAEKRPKKKSTKKVVRSASPVEEEINWDDFIIPESERTASPMKEEKPKRPLVPNSLGFGWWRPASGNLWDVVSQCQRACKGTFLEASVEACLVRAGADDVALSVWARISKSVVQLSAYYDANTLLENYTALSECTMDELQSVAVQLDSEYQELGPPTHFTCGLSNWARGAGRILYGFVAPTVEGIAGAGCRVIERAYELSKTVIDEIFSKMKSLFYDCFGNLFGHLNVLLSTIDSFWARASTWIMNILEKTHDCLKVLRDSAVWSLLLILVGGLILLSERFLQSIGIISKPGTILGIFLATFLGIFGYTFFRKDDTLVSDLLCAFKVAITGLFRTKPGPPGSPIIVDGDVVIPESAVEMSTCSFMGGLDIAIAAIGNVGASILGFKVGALQYAAKIATCLDQLRKGKDVLKEMTCWIIETLGALWNKITGREATFFDEVSAIVAVDIREWLEESQNLCLAAQTFSIGDKIVLEQCERLIADGHKLLRGMGDADRKLSSSFLSTVQRKVSDLEKIHTQSVRAGYFEGRRMEPFWVYIHGPSHCGKSLLMEPMSRELLRAGGFSESSIYTKNSCDKYWSRYRRQACVQIDDLSAGKTDPSLESQLINLVASKEVPLDMAEVEDKGILFDSAILVTSSNTAHVPTNANVNHAEAYKNRMNVVIQCRRKPEYSPAGVELEGTFQPFDPRNPQASIECMLQHRETHAPITGWISAGAAMAEAVNQFRLHREKEMILQSNHLSSFRPAHPIYTECATFLSMYARDASFVPPVDLGCKWEIPSGYMTIAAVDGRVFGFTQLGVCTEITKQLKFTDEMEQYTLDKFAPDITKTMASQSRFKLVGAFLKGMIREEDNVISLNSLGPKSTATQREFFETLGLAERVYLRAVQKKVNKIRTDPAFDVEALHARLLSTIATSYEYVRTYGPKVFPILMGFICVVFACYGFIMPLLSFASGGSAVGGMVAMEQMSAASVVSSGSSPIAHRNRAPPVQPRYARHRLAGASAEDAYAYEEMMVVLYVDSTVAPVVNAVRGPGRSIFMTRHQALMIPNNSTVVAHFSTRDVVEIHWEHDVVRKGEKKDTEIIQYRCPSIPELPSRCKKYFEYDLERDFPGPFTLDASCYRMQSPGKIDIELVSWTDHDAELRTRPLVIADPFGEDKYRREIPRYIQYGRPAQLHDCGAICVAKIGGQHRIVGLVISTDKHNTGVGLLPSALHMTTCSLSYVPEEWEEAPRGLKKLGWKHASELPHMPRKTQYVAVNEDLAIPFDNPKIPSVLVSDDPRTIGTPVEGKDPVLVAMEKFYEPMTDFTDEEVRPGQTEISLFEQVCDDIVQTWFDAGAEFEDVEDDVVINGDDDFDKLIMDTSEGYPYVLERTHGEKGKTRYFEGGPGAYTLKPGTSVYNDYHKLQEEVQVEGGIPEMVCIECPKDELLVERKVLQKLGTRNFEILELPKNMLFRKKFLHWALFLSDMRWCLPCQVGIVVQGREWGLLMDRLAAKNSVAYNCDYSKFDGLMSCQVLDAIGKMVNKCYSNANPNLKKKGKGELPGSPPQLARHNLLMSIFGRKCLARSQVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVVYGDDNLIAVDPSMQKIFTGEVIKKTLARKKITITDGSDKLSPVLEAKPLAQLDFLKRSFLVSDSGQVMPALDRTCIYSSLLYLRSADCDPIPLLHQNVQNALQELYYRQDREEFDNLRNFYFERLPMWRNGQHRLLDWNQCAEHWRARYTGCPSDNPAGVLDMLIDPRCKSFMLPAGPANWSMPIADRIFVCGPKFCPSGPSYTLCFNRLAAGETGVQIKPVHAATQGAMPTAKFVESFRSIKKRPELELAISAYESGSNLYFKGCAPYNDIWACAISFCSAFGYAQKQVLLHMYDNCKPLGASSLRSYFNKNLVGDGCARRCEIHTTSAIAKQVERLLPQVQCKHCEYDPEFASKPTTHLRKCTDPGVDGGKAMYIVRGLGRTAAKLVCSDMCDGHLMSCNTSFDKMVVDLFRQSCF

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
MN504771
EMBL· GenBank· DDBJ
QIC89936.1
EMBL· GenBank· DDBJ
Genomic RNA

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