A0A5S6RCG2 · A0A5S6RCG2_ORYSJ

Function

Names & Taxonomy

Protein names

  • Submitted names
    • Retroelement

Gene names

    • Name
      OSJNBa0004A10.20
    • Synonyms
      OSJNAa0053D03.15

Organism names

Accessions

  • Primary accession
    A0A5S6RCG2

Proteomes

Structure

Select color scale
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Source Identifier Method Resolution Chain Positions Links
AlphaFold AF-A0A5S6RCG2-F1 Predicted 1-1111 AlphaFold · Foldseek

3D structure databases

Family & Domains

Features

Showing features for compositional bias, region, domain.

Type
IDPosition(s)Description
Compositional bias1-18Basic and acidic residues
Region1-58Disordered
Compositional bias44-54Pro residues
Region201-299Disordered
Compositional bias215-225Polar residues
Compositional bias253-263Polar residues
Compositional bias276-285Polar residues
Domain347-414Retrotransposon gag
Domain846-1003Reverse transcriptase

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,111
  • Mass (Da)
    121,582
  • Last updated
    2020-02-26 v1
  • MD5 Checksum
    68570CD58C7EF8293C9C6FAC0C7A02D6
MPPKKVGKENVAKRKEGGSEGETVAEEGAEPSASEGEAGATSPPLGPPSYPPSAPTTSSDVEAVKAVAAAKALQVRDAVLSSYAPWAPSIAAFAQPASTSAAITTSQANANLEAQAEADMGAMCQNMAKLQDTLRQMQEQQQAPAPAIVVRLTPQVIQAPVRPAVPQVQYPKPTHTPQAMMEAASTLQAQFQAFLQQLNQPHNNIPRASPPAQAEGSTTQGTSAGQLMGQFALPSQVQGPSPQGPPSQFDPSTMAQAPTTFAQAVSPGYGIPRIRNSPTTESGLESNHDRPSHDAQPPMQAVASPFALPYPQLSWPAQQGAMIKPRTEKGLPLNWGIKNHPIPPQFNIYSWEQLRDVFVLNFRGTYEEPKTQQDLMGIRQRPGESARVYIRRFSQARCQVQDITKASIIHAASACLLEGELTRRLARKEPRTFEHLFRIIDGYARGEEDTKRRQEIQAEYDKAAAATTATMHASTQAQVQAQVPRVEEVPREAATNQAPQAEQRQDVQRRVIHDITRFDPPSQVSKRQKKMQLRAVHNIVSAGDGVPRYLSQPISFGLEDTEGVLFPHQDMLFVSAEMAGFEVRCILIDGGSSADVMFAGTYAKMGLPTLALSQAPTSLRGFGGEAVQVLGQALIKVAFGSQENRREEEILFDIVDIPYNYNAIFCRGTLTKFEAVSHHNYLKLKMPGPAGVIVVKGSQPSAVAATPFDREVHTLEVEGQEKAKSIPKPTPHGKVIQRQIDDFDPAKVISLGGDLSEQEVDGILAVLKKNIDIFAWGLDDVGGVSPYLIMHYLAVKPEAKTKKQKLRKMSADRQEAAKVEVNKLLRAGVIQEIDHPEWLANPVPMKKSNGKWRMCVDFTDLNKMCPKDDFPLPRIDQLVDSTAGCKLISFLDAYSGYHQIHMNPTDIPMTAFIMPFGTFCHLRMSFGLRNAGVTFTRLVYKVLGLQLGRNVEAYVDEIVVKSCKAFDHASDLQETFNNLRTAGMKLNPEKCVFGVHAGKLLGFLVSEWGIEANPEKIDAIQQMKPPSSVRQVQKLAGRIAALSRFLSKAAERGLSFFKTLRGAGKFSLTPECETTFDELKQYLQSPPALVSPVLAGVKCRFYTANICIKIR

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-18Basic and acidic residues
Compositional bias44-54Pro residues
Compositional bias215-225Polar residues
Compositional bias253-263Polar residues
Compositional bias276-285Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AC098682
EMBL· GenBank· DDBJ
AAM01116.1
EMBL· GenBank· DDBJ
Genomic DNA
AC131968
EMBL· GenBank· DDBJ
AAN04950.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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