A0A5M9Z0S6 · A0A5M9Z0S6_9LACO
- ProteinExodeoxyribonuclease III
- Genexth
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids275 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
Cofactor
Protein has several cofactor binding sites:
Mn2+ (UniProtKB | Rhea| CHEBI:29035 )
Note: Probably binds two magnesium or manganese ions per subunit.
Features
Showing features for binding site, active site, site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Binding site | 7 | Mg2+ 1 (UniProtKB | ChEBI) | |||
Binding site | 44 | Mg2+ 1 (UniProtKB | ChEBI) | |||
Active site | 128 | ||||
Active site | 167 | Proton donor/acceptor | |||
Binding site | 167 | Mg2+ 1 (UniProtKB | ChEBI) | |||
Binding site | 169 | Mg2+ 1 (UniProtKB | ChEBI) | |||
Site | 169 | Transition state stabilizer | |||
Site | 240 | Important for catalytic activity | |||
Binding site | 265 | Mg2+ 1 (UniProtKB | ChEBI) | |||
Active site | 266 | Proton acceptor | |||
Binding site | 266 | Mg2+ 1 (UniProtKB | ChEBI) | |||
Site | 266 | Interaction with DNA substrate | |||
GO annotations
Aspect | Term | |
---|---|---|
Molecular Function | DNA binding | |
Molecular Function | DNA-(apurinic or apyrimidinic site) endonuclease activity | |
Molecular Function | double-stranded DNA 3'-5' DNA exonuclease activity | |
Molecular Function | endonuclease activity | |
Molecular Function | metal ion binding | |
Molecular Function | phosphoric diester hydrolase activity | |
Biological Process | base-excision repair |
Keywords
- Molecular function
- Ligand
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageBacteria > Bacillota > Bacilli > Lactobacillales > Lactobacillaceae > Lactobacillus
Accessions
- Primary accessionA0A5M9Z0S6
Proteomes
Structure
Sequence
- Sequence statusComplete
- Length275
- Mass (Da)31,323
- Last updated2020-02-26 v1
- MD5 Checksum7733942C68D4799F5D2792252AE52A87
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
VUAV01000037 EMBL· GenBank· DDBJ | KAA8812310.1 EMBL· GenBank· DDBJ | Genomic DNA |