A0A5M8Q4B6 · A0A5M8Q4B6_9BACT
- ProteindTDP-4-dehydrorhamnose 3,5-epimerase
- GenerfbC
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids180 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
function
Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.
Catalytic activity
- dTDP-4-dehydro-6-deoxy-alpha-D-glucose = dTDP-4-dehydro-beta-L-rhamnose
Pathway
Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.
Features
Showing features for active site, site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Active site | 61 | Proton acceptor | |||
Active site | 131 | Proton donor | |||
Site | 137 | Participates in a stacking interaction with the thymidine ring of dTDP-4-oxo-6-deoxyglucose | |||
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | cytosol | |
Molecular Function | dTDP-4-dehydrorhamnose 3,5-epimerase activity | |
Biological Process | dTDP-rhamnose biosynthetic process | |
Biological Process | extracellular polysaccharide biosynthetic process |
Keywords
- Molecular function
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended namedTDP-4-dehydrorhamnose 3,5-epimerase
- EC number
- Alternative names
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageBacteria > Bacteroidota > Cytophagia > Cytophagales > Hymenobacteraceae > Rufibacter
Accessions
- Primary accessionA0A5M8Q4B6
Proteomes
Subcellular Location
UniProt Annotation
GO Annotation
Interaction
Subunit
Homodimer.
Structure
Sequence
- Sequence statusComplete
- Length180
- Mass (Da)19,862
- Last updated2020-02-26 v1
- ChecksumA66037FA158280AA
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
VKKZ01000026 EMBL· GenBank· DDBJ | KAA6430223.1 EMBL· GenBank· DDBJ | Genomic DNA |