A0A5J4ZN72 · A0A5J4ZN72_9ASTE

  • Protein
    DNA-directed RNA polymerase
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Predicted
  • Annotation score
    2/5

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentRNA polymerase II, core complex
Molecular FunctionDNA binding
Molecular FunctionRNA polymerase II activity

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA-directed RNA polymerase
  • EC number

Gene names

    • ORF names
      F0562_013354

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • J267
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > asterids > Cornales > Nyssaceae > Nyssa

Accessions

  • Primary accession
    A0A5J4ZN72

Proteomes

    • Identifier
    • Component
      Miscellaneous, Linkage group lg6

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for signal, chain.

Type
IDPosition(s)Description
Signal1-19
ChainPRO_502391872720-1170DNA-directed RNA polymerase

Family & Domains

Features

Showing features for domain, compositional bias, region.

Type
IDPosition(s)Description
Domain49-322RNA polymerase N-terminal
Compositional bias1014-1030Polar residues
Region1014-1040Disordered
Region1150-1170Disordered

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,170
  • Mass (Da)
    131,260
  • Last updated
    2019-12-11 v1
  • MD5 Checksum
    D045DF3D8033BAC07DDEEC6FD48726D0
MAHVEGILVLVLSFPVLNCLKTYEVMAILKKIPDETRKKLYGKGFFPQDGYILQYLPVPPNCLSVPDISDGISVMSSDLSVTMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQTAVAQYLQVRGTAKASRDIGTRFGISKEPNDSSTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVAEIGLPFEIAQRITFEERVNQHNMKYLQKLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHEDHTSLAAKAEVLELFSVEKQLPSSHSGNLNLQLATDSLLSLKMMLKSDFLNRAAAQQLAMFVSNSLPRPALLKAYSSGPLWTALQMLQTALPAHFDCCGERHLICKSEILKVDFNRDVMQSVINEIVTSIFVEKGPSEVLKFFNSIQPLLMENLFSEGFSVGLEDFSIARAIIENIQKKIQDISPLLYHLRSTYNELVELQLENHLRLVKMPVANFLLKSSAMGNLIDSKSDSAISKVVQQIGFLGLQLSDKGKFYSGALVAEMASLFQNKYPFSADYPSEEFGLEILLCSVNFKNDIFDRRVILYLNNCDCGRKYCRENAAYVVKNQLKRVSLKDTAVEFLIEYKRQQATYESSEIDAGLVGHVHLNKIPLKDSNISILEILEKCQDTINSFRKKKKVGHLFKRIVLSVSECCSFHQSCESKWLDMPCLKFFWQDTSDHHLERTSHILADTICPVLLETIIKGDPRVCTANIIWISPDTTTWIRNPCKSQKGELALDVVLEKEAVKKSGDAWRTVLDSCLPVIHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLSTSVTMVAKGILKEHLILLANSMTCAGNLIGFNMGGIKALSRSLNVQAPFTEATLFTPKKCFERAAEKRHVDSLSSIVASCSWGKHVAVGTGSPFDVLWGTREVGLNQQEGIDIFNFLHLVRTSLNGGESYSACLGEEIDSIELGENVDLGLSPEHSSSFEKPVFEDSAEFEYNLENQKWDGSRPSNSNWEKVPSPNVESSGGGEWVVDKKQKPSGWSSWGADRVQTDDIPSTRLYILDNVFNHHPDKAAKMGAGVDYIMVNKHTSFQESRCFYVVSADGRKEDFSYRKCLENFIKGRYPEKAEPFIAKYFFRKPRSGGNRERSLAPEEAGPENRP

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1014-1030Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CM018049
EMBL· GenBank· DDBJ
KAA8519098.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

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