A0A5F1SFV7 · A0A5F1SFV7_9HYPH

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

  • Couples ATP hydrolysis with the unwinding of duplex DNA by translocating in the 3'-5' direction.
    EC:5.6.2.4 (UniProtKB | ENZYME | Rhea)

Cofactor

Protein has several cofactor binding sites:
Mg2+ (UniProtKB | Rhea| CHEBI:18420 )

Zn2+ (UniProtKB | Rhea| CHEBI:29105 )

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentbacterial nucleoid
Cellular Componentcytoplasm
Cellular Componentreplisome
Molecular Function3'-5' DNA helicase activity
Molecular FunctionATP binding
Molecular FunctionDNA binding
Molecular Functionfour-way junction helicase activity
Molecular Functionisomerase activity
Molecular Functionnuclease activity
Biological ProcessDNA recombination
Biological ProcessDNA repair
Biological ProcessDNA replication
Biological ProcessSOS response

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA helicase RecQ
  • EC number

Gene names

    • Name
      recQ
    • ORF names
      C9417_17965

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • SEMIA 4088
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Rhizobiaceae > Rhizobium/Agrobacterium group > Rhizobium

Accessions

  • Primary accession
    A0A5F1SFV7

Proteomes

Subcellular Location

Family & Domains

Features

Showing features for domain, compositional bias, region.

TypeIDPosition(s)Description
Domain48-216Helicase ATP-binding
Domain237-386Helicase C-terminal
Compositional bias528-545Basic and acidic residues
Region528-548Disordered
Domain550-626HRDC

Sequence similarities

Belongs to the helicase family. RecQ subfamily.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    626
  • Mass (Da)
    69,132
  • Last updated
    2019-11-13 v1
  • Checksum
    FCCBAD3608903577
MPQPERQEPRFSVDDALFGEGTHVPAPLDVLKRVYGYSAFRGKQQQVIEHVVSGGDAVVLFPTGAGKSLCFQIPALCRDGIGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEASDVYRAISAGKLDLLYVTPERIATEGFCQMLGRAKIALFAIDEAHCVSQWGHDFRPEYRDLGRLAELFPGVPRIALTATADPHTRDDIIERLALDDAKVFTTSFDRPNITYEIVERDQPRQQLLRFLEGHRGDSGIVYCLSRAKVEDTAEWLNGQGIRALPYHAGMDRALRDANQDAFLKEEDLCLVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSNVWMAYGMADVIQRGRMIDEGGASEEIKRVERAKLNALLAICETAGCRRQSILSHFGEAHGGGCGNCDTCLKPVETWDGTEAAIKALAAVYRTGERFGTGHVIDVLMGTVNEKTERFGHIDMPVFGAGKDIPSRTWQSIFRQLLANGFISIDHTAFGAMKLQEQARAVFKRERQVFFRKDRPETGRRGKKAGRPEKQAHGLSGEAQALFDALRAERTRIAKELGVPPYVVFPDTTLIAFATERPRNHRDLLGISGVGQSKLDRYGDAFLAVISEFANR

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias528-545Basic and acidic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
QERI01000008
EMBL· GenBank· DDBJ
TGE95994.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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