A0A519M5A6 · A0A519M5A6_9BACT

  • Protein
    Ribonuclease 3
  • Gene
    rnc
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

  • Endonucleolytic cleavage to 5'-phosphomonoester.
    EC:3.1.26.3 (UniProtKB | ENZYME | Rhea)

Cofactor

Mg2+ (UniProtKB | Rhea| CHEBI:18420 )

Features

Showing features for binding site, active site.

119920406080100120140160180
Type
IDPosition(s)Description
Binding site18Mg2+ (UniProtKB | ChEBI)
Active site22
Binding site89Mg2+ (UniProtKB | ChEBI)
Active site92
Binding site92Mg2+ (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular Componentcytoplasm
Molecular Functionmetal ion binding
Molecular Functionribonuclease III activity
Molecular FunctionrRNA binding
Biological ProcessmRNA processing
Biological ProcessrRNA processing
Biological ProcesstRNA processing

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Ribonuclease 3
  • EC number
  • Alternative names
    • Ribonuclease III
      (RNase III
      )

Gene names

    • Name
      rnc
    • ORF names
      EOO55_04665

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • PMG_005
  • Taxonomic lineage
    Bacteria > Bacteroidota > Cytophagia > Cytophagales > Hymenobacteraceae > Hymenobacter

Accessions

  • Primary accession
    A0A519M5A6

Proteomes

Subcellular Location

Keywords

Interaction

Subunit

Homodimer.

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain8-103RNase III
Domain131-199DRBM

Sequence similarities

Belongs to the ribonuclease III family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    199
  • Mass (Da)
    21,839
  • Last updated
    2019-10-16 v1
  • Checksum
    7D81A78ABDE9D454
MVRAEPGAGRHQSNERLEFLGDAVLGTVVAEYLFRKFPYEQEGFLTETRSRIVNRESLNAIALKLGLDRLVQLDAAQTRVARSRSVNGNALEALVGAVYLDLGYKAARKFVLKGLIKPFVDVNTLTTTTSNYKSKLIEWAQRNGKAVRYDISGEPRPGGVMEFTATVILNEEVIATGMGLNKKQAEQLAAERALVALGV

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
SEBX01000183
EMBL· GenBank· DDBJ
RZJ56747.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
Help