A0A4Y1QDP0 · A0A4Y1QDP0_9TELE
- ProteinRhodopsin
- GeneRho
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids263 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
Features
Showing features for site, binding site.
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | membrane | |
Cellular Component | photoreceptor outer segment | |
Molecular Function | G protein-coupled photoreceptor activity | |
Molecular Function | metal ion binding | |
Biological Process | cellular response to light stimulus | |
Biological Process | phototransduction | |
Biological Process | visual perception |
Keywords
- Molecular function
- Biological process
- Ligand
Names & Taxonomy
Protein names
- Recommended nameRhodopsin
Gene names
Organism names
- Organism
- Strains
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Acheilognathidae > Acheilognathus
Accessions
- Primary accessionA0A4Y1QDP0
Subcellular Location
UniProt Annotation
GO Annotation
Membrane ; Multi-pass membrane protein
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transmembrane | 6-22 | Helical | ||||
Sequence: LIITGFPVNFLTLYVTL | ||||||
Transmembrane | 34-54 | Helical | ||||
Sequence: ILLNLAVADLFMVFGGFTTTM | ||||||
Transmembrane | 74-92 | Helical | ||||
Sequence: FFATLGGEMALWSIVTLAI | ||||||
Transmembrane | 112-132 | Helical | ||||
Sequence: AIMGVVFTWVMACSCAVPPLV | ||||||
Transmembrane | 162-182 | Helical | ||||
Sequence: FVIYMFLVHALIPFVVIFFCY | ||||||
Transmembrane | 213-235 | Helical | ||||
Sequence: VVLMGFAYLVCWLPYASVAWYIF |
Keywords
- Cellular component
PTM/Processing
Features
Showing features for disulfide bond, modified residue.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Disulfide bond | 69↔146 | |||||
Sequence: CNLEGFFATLGGEMALWSIVTLAIERWLVVCKPISNFRFGENHAIMGVVFTWVMACSCAVPPLVGWSRYIPEGMQCSC | ||||||
Modified residue | 255 | N6-(retinylidene)lysine | ||||
Sequence: K |
Post-translational modification
Contains one covalently linked retinal chromophore.
Keywords
- PTM
Structure
Family & Domains
Features
Showing features for domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 13-263 | G-protein coupled receptors family 1 profile | ||||
Sequence: VNFLTLYVTLEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSLHGYFVFGRLGCNLEGFFATLGGEMALWSIVTLAIERWLVVCKPISNFRFGENHAIMGVVFTWVMACSCAVPPLVGWSRYIPEGMQCSCGVDYYTRAEGYNNESFVIYMFLVHALIPFVVIFFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVLMGFAYLVCWLPYASVAWYIFTHKGTSFGPIFMTIPAFFAKTSAVYNPV |
Sequence similarities
Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
Keywords
- Domain
Family and domain databases
Protein family/group databases
Sequence
- Sequence statusFragment
- Length263
- Mass (Da)29,828
- Last updated2019-09-18 v1
- Checksum5E28DFA8C81147EF
Features
Showing features for non-terminal residue, sequence uncertainty.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Non-terminal residue | 1 | |||||
Sequence: A | ||||||
Sequence uncertainty | 149 | D or N | ||||
Sequence: D | ||||||
Non-terminal residue | 263 | |||||
Sequence: V |
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
LC369948 EMBL· GenBank· DDBJ | BBC83895.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369949 EMBL· GenBank· DDBJ | BBC83896.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369950 EMBL· GenBank· DDBJ | BBC83897.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369951 EMBL· GenBank· DDBJ | BBC83898.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369952 EMBL· GenBank· DDBJ | BBC83899.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369953 EMBL· GenBank· DDBJ | BBC83900.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369954 EMBL· GenBank· DDBJ | BBC83901.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369955 EMBL· GenBank· DDBJ | BBC83902.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369956 EMBL· GenBank· DDBJ | BBC83903.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369957 EMBL· GenBank· DDBJ | BBC83904.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369958 EMBL· GenBank· DDBJ | BBC83905.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369959 EMBL· GenBank· DDBJ | BBC83906.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369960 EMBL· GenBank· DDBJ | BBC83907.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369961 EMBL· GenBank· DDBJ | BBC83908.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369962 EMBL· GenBank· DDBJ | BBC83909.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369963 EMBL· GenBank· DDBJ | BBC83910.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369964 EMBL· GenBank· DDBJ | BBC83911.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369965 EMBL· GenBank· DDBJ | BBC83912.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369966 EMBL· GenBank· DDBJ | BBC83913.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369967 EMBL· GenBank· DDBJ | BBC83914.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369968 EMBL· GenBank· DDBJ | BBC83915.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369969 EMBL· GenBank· DDBJ | BBC83916.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369971 EMBL· GenBank· DDBJ | BBC83918.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369972 EMBL· GenBank· DDBJ | BBC83919.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369973 EMBL· GenBank· DDBJ | BBC83920.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369974 EMBL· GenBank· DDBJ | BBC83921.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369975 EMBL· GenBank· DDBJ | BBC83922.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369976 EMBL· GenBank· DDBJ | BBC83923.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369977 EMBL· GenBank· DDBJ | BBC83924.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369978 EMBL· GenBank· DDBJ | BBC83925.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369979 EMBL· GenBank· DDBJ | BBC83926.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369980 EMBL· GenBank· DDBJ | BBC83927.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369981 EMBL· GenBank· DDBJ | BBC83928.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369982 EMBL· GenBank· DDBJ | BBC83929.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369984 EMBL· GenBank· DDBJ | BBC83931.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369985 EMBL· GenBank· DDBJ | BBC83932.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369986 EMBL· GenBank· DDBJ | BBC83933.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369987 EMBL· GenBank· DDBJ | BBC83934.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369988 EMBL· GenBank· DDBJ | BBC83935.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369989 EMBL· GenBank· DDBJ | BBC83936.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369990 EMBL· GenBank· DDBJ | BBC83937.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369991 EMBL· GenBank· DDBJ | BBC83938.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369992 EMBL· GenBank· DDBJ | BBC83939.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369993 EMBL· GenBank· DDBJ | BBC83940.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369994 EMBL· GenBank· DDBJ | BBC83941.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369995 EMBL· GenBank· DDBJ | BBC83942.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369996 EMBL· GenBank· DDBJ | BBC83943.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369997 EMBL· GenBank· DDBJ | BBC83944.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369998 EMBL· GenBank· DDBJ | BBC83945.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC369999 EMBL· GenBank· DDBJ | BBC83946.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC370000 EMBL· GenBank· DDBJ | BBC83947.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC370001 EMBL· GenBank· DDBJ | BBC83948.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC370002 EMBL· GenBank· DDBJ | BBC83949.1 EMBL· GenBank· DDBJ | Genomic DNA |