A0A4V0IJ47 · A0A4V0IJ47_CAEEL

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmembrane
Molecular Functionsodium channel activity

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Degenerin deg-1

Gene names

    • Name
      deg-1
    • ORF names
      C47C12.6
      , CELE_C47C12.6

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • Bristol N2
  • Taxonomic lineage
    Eukaryota > Metazoa > Ecdysozoa > Nematoda > Chromadorea > Rhabditida > Rhabditina > Rhabditomorpha > Rhabditoidea > Rhabditidae > Peloderinae > Caenorhabditis

Accessions

  • Primary accession
    A0A4V0IJ47

Proteomes

Organism-specific databases

Subcellular Location

Membrane
; Multi-pass membrane protein

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane78-96Helical
Transmembrane769-795Helical

Keywords

  • Cellular component

PTM/Processing

Keywords

Expression

Gene expression databases

Family & Domains

Features

Showing features for compositional bias, region.

TypeIDPosition(s)Description
Compositional bias154-174Basic and acidic residues
Region154-180Disordered
Region201-220Disordered
Region344-437Disordered

Sequence similarities

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    834
  • Mass (Da)
    93,964
  • Last updated
    2019-07-31 v1
  • Checksum
    BDB1FA9D951076D3
MSNHHSKTKKTSMLGREDYIYSHDITNKNKKEKLNGASKNNDYNQDDDDETMKSKMMDFCDKTTAHGAKRVLIARNSFSKLMWGLIIFSFLLMFAYQASKLIFKFSAHEKITDISLKFDDVEFPAITFCNLNPYKKSLVMMVPSIRDTMDVYDNAKTHSKSEGEKKKPKVSRKQHSDASQQMVRELFAKEIEEGMVELKKSNKTLQSQNKSGRRRSQRSIENRRYEAIEAHCKCVGNIGMECIRFESPPRDPSSKCICTYDRDMEVAWPCFNISVWYDHECPLCHDDGYCESTLPSGTTSSDKWPCMCRNRGDTSERDDTPYCIGKAGVGKIEIRKLWLENNMTTTSTTTTTTTTPPPTTTSTTTTTTTTPPPTTTVSTSTSTTSTTTTTTTTTTPRPTTTEKTTTTPRPTTSTTSTTTTTHPPTTTTTPYPTRPNQRAIVSNPETIKAMGFQGMTDGVAMLTRAKENLMFTMAALSDKQRIALSQSKHEFIEMCSFNGKECDIDEDFRLHVDPEFGNCFTFNYDVNNNYTSSRAGPMYGIRVLLFVNTSDYMSTSESSGVRLAIHPPTEYPFPDTFGYSAPVGFASSFGIKKKVMQRLPAPYGECVETKKVVDRNYIYAGYDYHPEGCHRSCFQNGLIDDCSCGDPRFPVPEGYRHCSAFNATARTCLEKNIGSVGDFHHITQKMDKCVCKQSCEEIIHEVTFSCSKWPSGATDLGDCDGMTESECEQYYRLNAAMIEVFYEQLNYELLQESEAYGLVNLIADFGGHLGLWLGFSVITVMEVCVLLVDMISLFFKSRHEEKLLRQSTKRKDVPEDKRQITVGSGRKSDAFVSI

Computationally mapped potential isoform sequences

There are 6 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
P24585DEG1_CAEELdeg-1778
A0A4V0IKC5A0A4V0IKC5_CAEELdeg-1770
A0A4V6M3V2A0A4V6M3V2_CAEELdeg-1788
A0A4V0IN98A0A4V0IN98_CAEELdeg-1844
A0A4V0ILZ4A0A4V0ILZ4_CAEELdeg-1758
A0A4V0ILJ5A0A4V0ILJ5_CAEELdeg-1760

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias154-174Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
BX284606
EMBL· GenBank· DDBJ
VTW47533.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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