A0A4P7UH07 · A0A4P7UH07_DESDE

Function

function

Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.

Features

Showing features for binding site.

143150100150200250300350400
TypeIDPosition(s)Description
Binding site181-186ATP (UniProtKB | ChEBI)
Binding site193-198ATP (UniProtKB | ChEBI)
Binding site224ATP (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular FunctionATP-dependent activity, acting on RNA
Molecular Functionhelicase activity
Molecular FunctionRNA binding
Biological ProcessDNA-templated transcription termination

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Transcription termination factor Rho
  • EC number
  • Alternative names
    • ATP-dependent helicase Rho

Gene names

    • Name
      rho
    • ORF names
      DDIC_06055

Organism names

  • Taxonomic identifier
  • Strain
    • IC1
  • Taxonomic lineage
    Bacteria > Thermodesulfobacteriota > Desulfovibrionia > Desulfovibrionales > Desulfovibrionaceae > Desulfovibrio

Accessions

  • Primary accession
    A0A4P7UH07

Proteomes

Interaction

Subunit

Homohexamer. The homohexamer assembles into an open ring structure.

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain63-138Rho RNA-BD

Sequence similarities

Belongs to the Rho family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    431
  • Mass (Da)
    48,257
  • Last updated
    2019-07-31 v1
  • Checksum
    F49196570A6AF644
MRKKKATSTLLTDSALSLTDLKTRSMQELMELAEQYEIENASSMRKQELIFALLSTCASQNGSIYGDGVLEILPDGFGFLRSPLCSYMPGPDDIYVSPSQIRRFSLRKGDIVSGQIRPPKEGERYFALLKVTEIGFEPPEHAKNLVLFDNLTPIYPDRQLVMENGEKNLSNRVIDIMAPIGCGQRGLIVAPPRTGKTMLLQALANAINANNPDVYLIVLLIDERPEEVTDMERTVKKAEVISSTFDEPPQRHVQVCEMVLEKAKRLVERKRDVVILLDSITRLGRAYNAVTPSSGRVLSGGLDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMEIYLDRHLSEKRVFPAIDINRTGTRKEDLLLADDVLNRVWILRKILAPMSSIDSMEFLLDKMRATKSNKDFMNAMGK

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP036295
EMBL· GenBank· DDBJ
QCC85446.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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