A0A444U7M2 · A0A444U7M2_ACIRT

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleolus
Cellular ComponentP-body
Cellular Componentsno(s)RNA-containing ribonucleoprotein complex
Cellular Componentspliceosomal complex
Cellular ComponentU4/U6 x U5 tri-snRNP complex
Cellular ComponentU6 snRNP
Molecular FunctionRNA binding
Biological Processmaturation of SSU-rRNA
Biological ProcessmRNA splicing, via spliceosome
Biological ProcesstRNA processing

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Sm domain-containing protein

Gene names

    • ORF names
      EOD39_7300

Organism names

  • Taxonomic identifier
  • Strain
    • WHYD16114868_AA
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Chondrostei > Acipenseriformes > Acipenseridae > Acipenser

Accessions

  • Primary accession
    A0A444U7M2

Proteomes

Subcellular Location

Family & Domains

Features

Showing features for domain, compositional bias, region.

TypeIDPosition(s)Description
Domain7-79Sm
Compositional bias148-173Polar residues
Region148-186Disordered
Region201-238Disordered

Sequence similarities

Belongs to the snRNP Sm proteins family. SmF/LSm6 subfamily.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    262
  • Mass (Da)
    28,701
  • Last updated
    2019-05-08 v1
  • Checksum
    04A42F3CE533E884
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKYGDAFLRGNNGFSHGANPSACADMKPRHIRAQPHNPHNNHITLHTDRASYLPGDGVPEFFHLLLDYINFHTVWEASILSSGVEDSFLSAATPPPATDSSLVEQGLNQPDNSMVAGNPSPAPRRSGTDVVTQTSSADFLQQTEKWGSREQKGGVAKNTSADRGVLQRAGQQHYSRPREWRTGASTQNSFVLVQAEYNVITPPGK

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias148-173Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
SCEB01215143
EMBL· GenBank· DDBJ
RXM31069.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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