A0A3R9IGP0 · A0A3R9IGP0_STRMT

  • Protein
    peptidoglycan-N-acetylglucosamine deacetylase
  • Gene
    pgdA
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Predicted
  • Annotation score
    2/5

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

  • peptidoglycan-N-acetyl-D-glucosamine + H2O = peptidoglycan-D-glucosamine + acetate.
    EC:3.5.1.104 (UniProtKB | ENZYME | Rhea)

Features

Showing features for active site, binding site, site.

146350100150200250300350400450
TypeIDPosition(s)Description
Active site275Proton acceptor
Binding site276Zn2+ (UniProtKB | ChEBI)
Binding site326Zn2+ (UniProtKB | ChEBI)
Binding site330Zn2+ (UniProtKB | ChEBI)
Binding site367substrate
Site391Raises pKa of active site His
Active site417Proton donor

GO annotations

AspectTerm
Cellular Componentmembrane
Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Molecular Functionmetal ion binding
Biological Processcarbohydrate metabolic process

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    peptidoglycan-N-acetylglucosamine deacetylase
  • EC number

Gene names

    • Name
      pgdA
    • ORF names
      D8849_02345

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • KLC01
  • Taxonomic lineage
    Bacteria > Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus

Accessions

  • Primary accession
    A0A3R9IGP0

Proteomes

Subcellular Location

Cell membrane
; Single-pass membrane protein

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane16-38Helical

Keywords

  • Cellular component

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain268-442NodB homology

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    463
  • Mass (Da)
    52,746
  • Last updated
    2019-04-10 v1
  • Checksum
    0A0EEABE860748C5
MDKSRANRVEHDKKRIGLIALVAIFSVSICVLGSMIGYKIYTKQSFEQRIETLKKEKDDQLSEGNQKDHFRKGQAEVIAYYPLQGEQVISSVKEIMTQDIKENLEDKENLVFYYTEKQDSTLKGIVNRSVMKQVYDLTSSKVEETEKTSLAKVHLTEDGKPFTLDQLFSDPSKAKEQLLKEITSFLQDKKLDQEKIDQVVKGFSDQDLSAWNFDYKDSQIILYPSQSVENLDEIALPVSSFFDVVQSSYLLDKDAELYKAYYEKKNQKVVALTFDDGPNPATTNQALDTLSKYGIKATFFVLGKNVSGNEEILKRMKSDGHVIGNHSWSHPVLSKLSLDEAKKQITDTEDALTKVLGSSSKLMRPPYGAITDDIRNSLDLSFIMWDVDSLDWKSKNEAAILTEIQRQVRNGSIILMHDIHAETVNALPKVIDYLKGQGYDFVTIPDLLDSRLKAHQLYYDRDQ

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
RJNW01000001
EMBL· GenBank· DDBJ
RSI88524.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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