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A0A3Q9FRC6 · A0A3Q9FRC6_9BACT

  • Protein
    Multifunctional fusion protein
  • Gene
    secD
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentplasma membrane
Molecular Functionprotein-transporting ATPase activity
Biological Processintracellular protein transmembrane transport
Biological Processprotein targeting
Biological Processprotein transport by the Sec complex

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Multifunctional fusion protein

Including 2 domains:

  • Recommended name
    Protein translocase subunit SecD
  • Recommended name
    Protein-export membrane protein SecF

Gene names

    • Name
      secD
    • Synonyms
      secF
    • ORF names
      EI427_12015

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • L12M1
  • Taxonomic lineage
    Bacteria > Bacteroidota > Cytophagia > Cytophagales > Flammeovirgaceae > Flammeovirga

Accessions

  • Primary accession
    A0A3Q9FRC6

Proteomes

Subcellular Location

Cell membrane
; Multi-pass membrane protein

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane491-511Helical
Transmembrane586-608Helical
Transmembrane614-638Helical
Transmembrane675-693Helical
Transmembrane837-857Helical
Transmembrane869-889Helical
Transmembrane921-939Helical
Transmembrane945-969Helical

Keywords

Interaction

Subunit

Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.
Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.

Family & Domains

Features

Showing features for domain, compositional bias, region.

Type
IDPosition(s)Description
Domain184-242Protein translocase subunit SecDF P1
Compositional bias271-287Basic and acidic residues
Region271-302Disordered
Compositional bias288-302Polar residues
Domain372-469SecDF P1 head subdomain
Domain472-643Protein export membrane protein SecD/SecF C-terminal
Domain786-973Protein export membrane protein SecD/SecF C-terminal

Sequence similarities

Belongs to the SecD/SecF family. SecD subfamily.
Belongs to the SecD/SecF family. SecF subfamily.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    988
  • Mass (Da)
    107,562
  • Last updated
    2019-04-10 v1
  • MD5 Checksum
    9431DBFA4E063F9F7AD90F2CF16B97F2
MRNRGFVLFIAITVTLFSLFDLSFTVVSRSVQNSADEYAMDSKGHVDYFKKQAYIDSVWKLPVYDLGFTSYTYEEVKNKELALGLDLQGGMSVTLEVSPIEVIKAMAGSNVDPAFEKSIAAASAAEKENRESFTDNFFSALEENAPNVPFATYFATSSNKGRISFNSPNDKVKKLVESEVDGAVDRAFEIIRTRIDKFGVTQPNIQRLQGTNRISIELPGVDNPERVRNLVQGVAKLEFLEVWTNQEAQPYIFQMNQAWVKQEEARKKLSGEVAKADAPKKEASENSLFEGDSTTAAADSAKVDETSVSPLLAKMQGGLVYSDDDTAAVNKMLRDTEVMDVIPSDMKFIWAHKPLAEQNGKSFYELFPVKKDREAKLGGDVITDAIQTFDQRAQPAVSMSMNVEGAKKWKKMTGQNLGRRIAIALDNEVYTAPTVNSEIDGGRSEITGSFDINEAKDLANVLKAGKLPAPTRIIEEVVVGPSLGKVAQSEGLNSVLLGLSLVIVFMIVYYAKGGIIANVALLSNIFFIVGILAELGAALTLPGIAGIVLTIGMSIDANVLIFERIREEQRAGRSLLQAINNGYDRAFWTIFDANVTTLLTGAFLYVFGMGPIKGFAVTLMIGIVCSFFSAVFISRLIVSYFTNKYGEETKLSFETGLSKKLAGQSNYDFMGKRKIAYAASVVVIIAGLASLSINGLNLGVDFTGGRSYIVSFDEAIVPSKLQASLVKDFDGKSVEVKTYGNDQTLKITTAYLVDDESTEADTKVQQIVVKGIEKFTGDKFSDKQKVDAGTFVIPSTSKVGATIADDITDGAEEAVLFSLLGIFAYIWVRFRRANFGIGAIAALVHDTLIVFGAFGIANLLGAGFELDQVFIAAILTVIGYSINDTVVVFDRVREEEENSKDGDQLINVINKAINGTLNRTIITSFTTLLVIFVLLVFGGEALRGFSFSLFVGIMVGTYSSIFIAAPVVFDTSKKEIRKKATEATAVKA

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias271-287Basic and acidic residues
Compositional bias288-302Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP034562
EMBL· GenBank· DDBJ
AZQ62937.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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