A0A3L6T9F3 · A0A3L6T9F3_PANMI
- ProteinPentatricopeptide repeat-containing protein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1024 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | chloroplast stroma | |
Molecular Function | mRNA binding | |
Molecular Function | rRNA primary transcript binding | |
Biological Process | positive regulation of translation |
Keywords
- Ligand
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > PACMAD clade > Panicoideae > Panicodae > Paniceae > Panicinae > Panicum
Accessions
- Primary accessionA0A3L6T9F3
Proteomes
Subcellular Location
UniProt Annotation
GO Annotation
PTM/Processing
Features
Showing features for signal, chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-25 | |||||
Sequence: MDQDEYLSLCLMALAAACQQAGATA | ||||||
Chain | PRO_5018213931 | 26-1024 | ||||
Sequence: APGRPHDVAAPSSSATASSAELPLHFRCPLCCKAFTSYQALGGHKASHRKPPAGGGAAPLFHQKEAKTTVEASSASGSGGTGRHVCTVCRRGFDTGQALGGHKRFHYLHGPSASASASLPVPSAAVPSAVGGFDLNLAPLVPEIGFPGVRRRGEDDEPRLGRPLDPSRGGTGGDDQPWHLPQSLSLPARRALVALLADPAEHASPRDILSALPEIDLSAVLNALASRGGHPSVALAAVRAARDLHGDRALHHPRVLSAAVRVLTRAGHLAEASALLEAAPAPDASAYTALVSAFSRAGRFRDAVNVFRRMVDSGVRPALVTYNVVLHVYSKMTVPWKEVVALVDSMKEDGVAMDRYTYNTLISCCRRRGLYREAAQLFDEMRAAGFKPDKVTFNSLLDVYGKARRHEDAVEVLKEMENAGCPPSVVTYNSLISAYVKDGLLKEALELKTEMELKGMKPDVVTYTTLISGLDRIGKIDAAVGTYNEMVRNGCSPNLCTYNALIKLHGVRGKFIEMMAVFDELKSAAYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPETDTYVSLISSYSRCGLFDQAMEIYKRMMEAGIYPDISTYNAVLSALARGGCWEQAEKLFAEMEDRDCKPNELSYSSLLHAYANAKKLDKMKALSEDIYAERIEPHSWLVKTLVLVNNKVNNLSETEKAFEELRRRRRSLDINVLNAMVSIYGKNRMVKKVEEVLSLMKENSINHSAATYNSLMHMYSRLGDCEKCETILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANAMFEEAIDLVRYMVAQGCKPNERTYNSILQGYCRHGRMLHSCGVRFTEDVYFCDRNAPAGDRDITAARLSRTHWREELGRTGGTSLEPSVSHSSRPVIPCGLEPWADRLDLDPGRRLASGAGRGIPAFVVRFTSVIHRDPRRQSSGNSARFSAVRSGGNLSRSRLLSKHVKQLTLE |
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias, repeat, coiled coil.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 51-78 | C2H2-type | ||||
Sequence: FRCPLCCKAFTSYQALGGHKASHRKPPA | ||||||
Domain | 109-136 | C2H2-type | ||||
Sequence: HVCTVCRRGFDTGQALGGHKRFHYLHGP | ||||||
Region | 171-206 | Disordered | ||||
Sequence: FPGVRRRGEDDEPRLGRPLDPSRGGTGGDDQPWHLP | ||||||
Compositional bias | 173-188 | Basic and acidic residues | ||||
Sequence: GVRRRGEDDEPRLGRP | ||||||
Repeat | 308-342 | PPR | ||||
Sequence: DASAYTALVSAFSRAGRFRDAVNVFRRMVDSGVRP | ||||||
Repeat | 379-413 | PPR | ||||
Sequence: DRYTYNTLISCCRRRGLYREAAQLFDEMRAAGFKP | ||||||
Repeat | 414-448 | PPR | ||||
Sequence: DKVTFNSLLDVYGKARRHEDAVEVLKEMENAGCPP | ||||||
Repeat | 449-483 | PPR | ||||
Sequence: SVVTYNSLISAYVKDGLLKEALELKTEMELKGMKP | ||||||
Repeat | 484-518 | PPR | ||||
Sequence: DVVTYTTLISGLDRIGKIDAAVGTYNEMVRNGCSP | ||||||
Repeat | 519-553 | PPR | ||||
Sequence: NLCTYNALIKLHGVRGKFIEMMAVFDELKSAAYVP | ||||||
Repeat | 554-588 | PPR | ||||
Sequence: DVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP | ||||||
Repeat | 589-623 | PPR | ||||
Sequence: ETDTYVSLISSYSRCGLFDQAMEIYKRMMEAGIYP | ||||||
Repeat | 624-658 | PPR | ||||
Sequence: DISTYNAVLSALARGGCWEQAEKLFAEMEDRDCKP | ||||||
Repeat | 659-693 | PPR | ||||
Sequence: NELSYSSLLHAYANAKKLDKMKALSEDIYAERIEP | ||||||
Coiled coil | 704-731 | |||||
Sequence: VNNKVNNLSETEKAFEELRRRRRSLDIN | ||||||
Repeat | 764-798 | PPR | ||||
Sequence: SAATYNSLMHMYSRLGDCEKCETILTEIKSSGMRP | ||||||
Repeat | 799-833 | PPR | ||||
Sequence: DRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKP | ||||||
Repeat | 834-868 | PPR | ||||
Sequence: DIVTYNIFIKSYVANAMFEEAIDLVRYMVAQGCKP |
Sequence similarities
Belongs to the PPR family. P subfamily.
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,024
- Mass (Da)112,140
- Last updated2019-02-13 v1
- Checksum6BB633C8B72463C1
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 173-188 | Basic and acidic residues | ||||
Sequence: GVRRRGEDDEPRLGRP |
Keywords
- Technical term