A0A3L6T9F3 · A0A3L6T9F3_PANMI

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentchloroplast stroma
Molecular FunctionmRNA binding
Molecular FunctionrRNA primary transcript binding
Biological Processpositive regulation of translation

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Pentatricopeptide repeat-containing protein

Gene names

    • ORF names
      C2845_PM03G11180

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > PACMAD clade > Panicoideae > Panicodae > Paniceae > Panicinae > Panicum

Accessions

  • Primary accession
    A0A3L6T9F3

Proteomes

Subcellular Location

PTM/Processing

Features

Showing features for signal, chain.

TypeIDPosition(s)Description
Signal1-25
ChainPRO_501821393126-1024

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain, region, compositional bias, repeat, coiled coil.

TypeIDPosition(s)Description
Domain51-78C2H2-type
Domain109-136C2H2-type
Region171-206Disordered
Compositional bias173-188Basic and acidic residues
Repeat308-342PPR
Repeat379-413PPR
Repeat414-448PPR
Repeat449-483PPR
Repeat484-518PPR
Repeat519-553PPR
Repeat554-588PPR
Repeat589-623PPR
Repeat624-658PPR
Repeat659-693PPR
Coiled coil704-731
Repeat764-798PPR
Repeat799-833PPR
Repeat834-868PPR

Sequence similarities

Belongs to the PPR family. P subfamily.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,024
  • Mass (Da)
    112,140
  • Last updated
    2019-02-13 v1
  • Checksum
    6BB633C8B72463C1
MDQDEYLSLCLMALAAACQQAGATAAPGRPHDVAAPSSSATASSAELPLHFRCPLCCKAFTSYQALGGHKASHRKPPAGGGAAPLFHQKEAKTTVEASSASGSGGTGRHVCTVCRRGFDTGQALGGHKRFHYLHGPSASASASLPVPSAAVPSAVGGFDLNLAPLVPEIGFPGVRRRGEDDEPRLGRPLDPSRGGTGGDDQPWHLPQSLSLPARRALVALLADPAEHASPRDILSALPEIDLSAVLNALASRGGHPSVALAAVRAARDLHGDRALHHPRVLSAAVRVLTRAGHLAEASALLEAAPAPDASAYTALVSAFSRAGRFRDAVNVFRRMVDSGVRPALVTYNVVLHVYSKMTVPWKEVVALVDSMKEDGVAMDRYTYNTLISCCRRRGLYREAAQLFDEMRAAGFKPDKVTFNSLLDVYGKARRHEDAVEVLKEMENAGCPPSVVTYNSLISAYVKDGLLKEALELKTEMELKGMKPDVVTYTTLISGLDRIGKIDAAVGTYNEMVRNGCSPNLCTYNALIKLHGVRGKFIEMMAVFDELKSAAYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPETDTYVSLISSYSRCGLFDQAMEIYKRMMEAGIYPDISTYNAVLSALARGGCWEQAEKLFAEMEDRDCKPNELSYSSLLHAYANAKKLDKMKALSEDIYAERIEPHSWLVKTLVLVNNKVNNLSETEKAFEELRRRRRSLDINVLNAMVSIYGKNRMVKKVEEVLSLMKENSINHSAATYNSLMHMYSRLGDCEKCETILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANAMFEEAIDLVRYMVAQGCKPNERTYNSILQGYCRHGRMLHSCGVRFTEDVYFCDRNAPAGDRDITAARLSRTHWREELGRTGGTSLEPSVSHSSRPVIPCGLEPWADRLDLDPGRRLASGAGRGIPAFVVRFTSVIHRDPRRQSSGNSARFSAVRSGGNLSRSRLLSKHVKQLTLE

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias173-188Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
PQIB02000002
EMBL· GenBank· DDBJ
RLN34138.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp