A0A3B3IT29 · A0A3B3IT29_HUMAN
- ProteinLa ribonucleoprotein 1B
- GeneLARP1B
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids536 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score1/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Molecular Function | RNA binding |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionA0A3B3IT29
Proteomes
Organism-specific databases
Disease & Variants
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 324 variants from UniProt as well as other sources including ClinVar and dbSNP.
Organism-specific databases
Genetic variation databases
PTM/Processing
Features
Showing features for modified residue (large scale data).
Type | ID | Position(s) | Source | Description | |||
---|---|---|---|---|---|---|---|
Modified residue (large scale data) | 261 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 291 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 337 | PRIDE | Phosphoserine | ||||
Sequence: S |
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-70 | Disordered | ||||
Sequence: MSTRAPMPAAHSREDPPAVTAERESLLAAANRPAEQPPPPECEGKEAAREERAAAATSAGARGEPSPALV | ||||||
Region | 86-370 | Disordered | ||||
Sequence: ALHLAHKARGPGGPFGGEPPPPPPPPSPLPPLLRDPPAEDAREEVAAGPAEKRQPPLLPPKGNPWTKKPPQHLSPDTTGPPPPPLETLEAEFGSLKIIKAGKLKTKKSNKASDFSDMENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLN | ||||||
Compositional bias | 99-120 | Pro residues | ||||
Sequence: PFGGEPPPPPPPPSPLPPLLRD | ||||||
Compositional bias | 199-225 | Polar residues | ||||
Sequence: FSDMENWPTPSELVNTGFQSVLSQGNK | ||||||
Compositional bias | 226-257 | Basic and acidic residues | ||||
Sequence: KPQNRKEKEEKVEKRSNSDSKENRETKLNGPG | ||||||
Compositional bias | 293-308 | Polar residues | ||||
Sequence: ERPGSRNSSRCQPEAN | ||||||
Compositional bias | 309-337 | Basic and acidic residues | ||||
Sequence: KPTHNNRRNDTRSWKRDREKRDDQDDVSS | ||||||
Domain | 410-500 | HTH La-type RNA-binding | ||||
Sequence: PVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPG |
Family and domain databases
Sequence
- Sequence statusComplete
- Length536
- Mass (Da)59,645
- Last updated2018-12-05 v1
- Checksum958F1611F3DB6E40
Computationally mapped potential isoform sequences
There are 9 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q659C4 | LAR1B_HUMAN | LARP1B | 914 | ||
D6RJB0 | D6RJB0_HUMAN | LARP1B | 574 | ||
D6R9W6 | D6R9W6_HUMAN | LARP1B | 518 | ||
H0Y9K3 | H0Y9K3_HUMAN | LARP1B | 491 | ||
H0Y9B4 | H0Y9B4_HUMAN | LARP1B | 25 | ||
G3V0E9 | G3V0E9_HUMAN | LARP1B | 358 | ||
A0A3B3ISF0 | A0A3B3ISF0_HUMAN | LARP1B | 1115 | ||
A0A994J4X5 | A0A994J4X5_HUMAN | LARP1B | 902 | ||
A0A994J4H9 | A0A994J4H9_HUMAN | LARP1B | 775 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 99-120 | Pro residues | ||||
Sequence: PFGGEPPPPPPPPSPLPPLLRD | ||||||
Compositional bias | 199-225 | Polar residues | ||||
Sequence: FSDMENWPTPSELVNTGFQSVLSQGNK | ||||||
Compositional bias | 226-257 | Basic and acidic residues | ||||
Sequence: KPQNRKEKEEKVEKRSNSDSKENRETKLNGPG | ||||||
Compositional bias | 293-308 | Polar residues | ||||
Sequence: ERPGSRNSSRCQPEAN | ||||||
Compositional bias | 309-337 | Basic and acidic residues | ||||
Sequence: KPTHNNRRNDTRSWKRDREKRDDQDDVSS |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AC096898 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC099340 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC108045 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC114735 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC124030 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. |