A0A3A8K0Q0 · A0A3A8K0Q0_9BACT

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

  • Couples ATP hydrolysis with the unwinding of duplex DNA by translocating in the 3'-5' direction.
    EC:5.6.2.4 (UniProtKB | ENZYME | Rhea)

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular FunctionATP binding
Molecular FunctionDNA binding
Molecular FunctionDNA topoisomerase activity
Molecular Functionhelicase activity
Molecular Functionhydrolase activity
Molecular Functionmetal ion binding
Biological ProcessDNA recombination
Biological ProcessDNA topological change

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • DNA topoisomerase III
      (EC:5.99.1.2
      )

Gene names

    • Name
      topB
    • ORF names
      D7X32_19025

Organism names

  • Taxonomic identifier
  • Strain
    • CA043D
  • Taxonomic lineage
    Bacteria > Myxococcota > Myxococcia > Myxococcales > Cystobacterineae > Myxococcaceae > Corallococcus

Accessions

  • Primary accession
    A0A3A8K0Q0

Proteomes

Family & Domains

Features

Showing features for region, domain, compositional bias.

TypeIDPosition(s)Description
Region1-28Disordered
Domain29-162Toprim
Region500-532Disordered
Compositional bias504-518Basic and acidic residues
Region672-705Disordered
Region858-889Disordered
Domain912-1080Helicase ATP-binding
Domain1111-1268Helicase C-terminal
Region1461-1569Disordered
Compositional bias1483-1503Basic and acidic residues
Domain1566-1640HRDC

Sequence similarities

Belongs to the helicase family. RecQ subfamily.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,640
  • Mass (Da)
    177,522
  • Last updated
    2018-12-05 v1
  • Checksum
    8DCA2666D813F5EB
MGESPGWDRSVSRDGSVDGGPARGGRGSVVAVVAEKPAVARDIARVLGATERGEGCLRGNGYVVTWAIGHLVGLAQPHEIRPEWKKWHRSHLPMLPADWPLVVSDSTKAQFEVVRRVMNAPEVSSVVCATDAGREGELIFRYIYDAAGCRKPVRRLWVSSLTERAIRDGFQHLKDGKAYAPLADAAMGRSRADWLVGMNLSRLYTLASGTYGSMLSVGRVQTPTLAMVVERELAIRDFVPRDYLEVVATFAPRGKGVPAGARYQGTWFRSGPDGKPVIPPGYDSVREARRLDADGVEAGRVIDRVRSGSAVVESLDAETKRMPPPLLYDLTELQRHANRLFGFSAQRTLEVAQALYEKHKLLSYPRTASRHLSETVADTLPEVVRAIQAPYQEDLAPGTGERPLGKRYVDDAKVTDHHAIIPTPMPASGVRLSPDEQRLYDLVCRRLLQAWHEDHVWKVTTVITAVTSKGAAGPVVDRFHSAGTQVEKVGWKVLDVGGGQKAPRLKAEGKKGADKDKEDEPDDEPQDLPPGLARGQVQTVEDVEAVKKRTRPPPRFTEATLLTAMESAGRTLDEKELVDAMRDTGLGTPATRAATIELLLEREYLTREGKRLVATEKGIHLIGVVHPDVKSPVMTGQWEAWLQRIERGQGALNAFMSGIEAYVREVVGQAPTSLPPTPAQAGPGSRNGSAPARFEATRPHPAQGPAEELFRTREAATATVQSAVRANATRNEVGASASMAQGGEGSRAGGAFGHGAAGGARQATGAPASGAYGGSAVPLGDARHAGASTHGSYSGSDGHAGAARFASGAPAHGPLGAVGGGMGTAAGRTARAAPLRVQDLPPTIPSAEVRTAFVQASSEGFGRAKRQPQGVDMGSGRPERVHRAPTPPDKLRGLLKEAFGFPDFRPYQEEVCRAATSGEDLLLVMPTGAGKSLCYQLPGLARAGTTVVVSPLIALMEDQVLRLQSLGFAADRIHSGRDRATSRQVCAEYLEGRLDFLFIAPERLGVPGFVELLARRTPSLIAIDEAHCISQWGHDFRPDYRLLGSRMPLLRPAPVVALTATATPDVQKDIVQQLGLRGSRGGAAHTFIHGFRRTNIAIEVRELNPGARGDAILSLLKNPEHRPAIVYASTRKHAEQYADLLAHDFHSAPYHAGLQPSERDRIQAAFLKGHLEVIVATTAFGMGIDKPDVRTVIHAALPASLEGYYQELGRAGRDGKDSRAVLLHAFVDRRTHEFFHRRDYPDPSVLERIYQATSNEMEPKASIQARVRGDPEIFDKALEQLWIHGGVEMTPDEDVRRGRAGWAVAYIAQRERKQLHLEQMGRYAEAHDCRMRHLVAHFGDVQDSGAACGLCDVCAPESCEVVRFEEPSAMEAHALGRILEALHARDGQATGRLHRELFGEQLHRRDFERLVGGLVRAGLLRLDSDSFDKDGQVILFQRLSLTDTGRRARVIAPGQVVLPQAREVPSKKRKGRTAAGGTKRTTRKRAASAEASPRGRGKARRGATESWAPRGASDDADSNPRAFPTDAPPAGRSGWRARATPESSPAPRASWNASRNAPPEPGFSAPPASPALVETLKEWRLTEARKRKVPAFRILTDRVLDAIASARPSSGAELMSIHGVGPALTERYGPQILSLVSRRR

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias504-518Basic and acidic residues
Compositional bias1483-1503Basic and acidic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
RAWE01000064
EMBL· GenBank· DDBJ
RKH01838.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

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