A0A396HQY2 · LEC5_MEDTR

Function

function

May be involved in arbuscular mycorrhizal (AM) symbiosis with AM fungi.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmembrane
Molecular Functioncarbohydrate binding
Biological Processresponse to symbiotic fungus

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Lectin 5
  • Short names
    MtLec5
  • Alternative names
    • Agglutinin LEC5

Gene names

    • Name
      LEC5
    • ORF names
      MtrunA17_Chr5g0411721
    • Ordered locus names
      MTR_5g031030

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Jemalong A17
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Fabales > Fabaceae > Papilionoideae > 50 kb inversion clade > NPAAA clade > Hologalegina > IRL clade > Trifolieae > Medicago

Accessions

  • Primary accession
    A0A396HQY2
  • Secondary accessions
    • A9YWS2
    • Q2PP78

Proteomes

Genome annotation databases

Subcellular Location

Membrane
; Single-pass membrane protein

Features

Showing features for topological domain, transmembrane.

Type
IDPosition(s)Description
Topological domain1-16Cytoplasmic
Transmembrane17-37Helical
Topological domain38-282Extracellular

Keywords

PTM/Processing

Features

Showing features for chain, glycosylation.

Type
IDPosition(s)Description
ChainPRO_00004500441-282Lectin 5
Glycosylation161N-linked (GlcNAc...) asparagine

Keywords

Proteomic databases

PTM databases

Expression

Induction

Accumulates in roots, in a RAM1-dependent manner, during colonization by arbuscular mycorrhizal (AM) fungi (e.g. Glomus versiforme and G.intraradices).

Developmental stage

Expressed in cortical cells containing arbuscules of mycorrhizal roots upon arbuscular mycorrhizal (AM) symbiosis with AM fungi (e.g. Glomus intraradices).

Interaction

Protein-protein interaction databases

Family & Domains

Sequence similarities

Belongs to the leguminous lectin family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    282
  • Mass (Da)
    30,778
  • Last updated
    2018-12-05 v1
  • Checksum
    5069079ACD7B167F
MHHTQHNTMANSIPKLLATQNPFSVSLSIFFFLLLLINNVKSDSLSFNFPKFDTDALNIVIDGDAKTTGGVLQLTKKDQFGNPSPHSVGFSAFFGAIQLSDKQSGKVADFTTEFSFVVNPKGSQLHGDGFAFYIASLDYDFPEKSSDGGFLGLFDKETAFNTSKNSIVAVEFDSFANEWDPNSPHIGIDINTIESSISVPWPIDRQPQGTIGKARISYNTASKDLSVFVTYPNSPAKVDVIVSYPIDFASVLSEWVYVGFSGATGQVAETHDILSWSFVSNL

Sequence caution

The sequence ABY48144.1 differs from that shown. Reason: Erroneous initiation Truncated N-terminus.
The sequence AES95920.1 differs from that shown. Reason: Erroneous initiation Truncated N-terminus.

Features

Showing features for sequence conflict.

TypeIDPosition(s)Description
Sequence conflict92-94in Ref. 5; ABC47811

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
EU306659
EMBL· GenBank· DDBJ
ABY48144.1
EMBL· GenBank· DDBJ
Genomic DNA Different initiation
PSQE01000005
EMBL· GenBank· DDBJ
RHN54883.1
EMBL· GenBank· DDBJ
Genomic DNA
CM001221
EMBL· GenBank· DDBJ
AES95920.1
EMBL· GenBank· DDBJ
Genomic DNA Different initiation
DQ314207
EMBL· GenBank· DDBJ
ABC47811.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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