A0A346JL88 · A0A346JL88_JUNCM

Function

function

Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmembrane
Cellular Componentplastid

Names & Taxonomy

Protein names

  • Submitted names
    • Hypothetical chloroplast RF19

Gene names

    • Name
      ycf1

Encoded on

  • Plastid

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Pinopsida > Pinidae > Conifers II > Cupressales > Cupressaceae > Juniperus

Accessions

  • Primary accession
    A0A346JL88

Subcellular Location

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane12-35Helical
Transmembrane41-59Helical
Transmembrane71-88Helical
Transmembrane108-126Helical
Transmembrane147-165Helical

Keywords

Interaction

Subunit

Part of the Tic complex.

Family & Domains

Features

Showing features for region, compositional bias, coiled coil.

TypeIDPosition(s)Description
Region206-240Disordered
Compositional bias210-224Basic residues
Compositional bias442-465Basic and acidic residues
Region442-466Disordered
Region1451-1475Disordered
Compositional bias1457-1475Basic residues
Region1580-1614Disordered
Region1654-1686Disordered
Compositional bias1655-1673Basic and acidic residues
Region1753-1779Disordered
Coiled coil1787-1817
Coiled coil2253-2294

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    2,363
  • Mass (Da)
    282,650
  • Last updated
    2018-11-07 v1
  • Checksum
    A3CCE652FB687B8F
MDNRKIVPAGNFVLSGSFVAQLVVFSSIYVAPIYASIWKPHLMTIMLVPVLFFLIFQRSLIRRYPWLQNPAVEFFIGVALQLLNPALFGKSIYTRLINLMLFRYSGNFLFLLSTAAGWLSGQILFVKMTKIFCSRVENDVPLQRDRRGEFFLFSFQILFFGYAMVACYGRNPSLIATKWNDSRTFIQGPREELEELSLELSDKKKSFRSELKSPNKKRKHKKHKPETPTNTEKNEENVNKPSITLPSSFKTLVKILSDQVIVEADKEKISPFLIKRWPLILFDYNRFNDPLRYVSIGDYILRGPVRSQVAEYFFDVCLSDGHQKISFTAPPSISFFAKMASLGDQSLDSNQDHLDEWIEKKWERKTSLGEELENRVRALSNGSPVVKILEKKMRFSRTKDKKRLSEVDDPLLSGPFRGSMNQYQFKSPWMLYSEEYLKEQKNKLAESKNQDSTNKNHDSTNKNRDSTNRLCRFSLIRPENKERIVQPRIKLISKWWIEKIRMVLLEEQNRRKWLDESTLEDLKNKYEKIYPKNLSSLEYVFNTLVPAPLKERIEKDIASCEKKLLTNYLLHIFLETTGTKWELLLSALPTEQALLYERLFFINSDEFSDSRVSMDIEIEISEKDILKDFAADILEEDPPSSNKEHTKDKKHKSDKSNIHLDEYFFEKERSEQDMRDFADFHELYVLYSKLIEKDKTRFDDYEPRIRDFNRFVVPKLPSTLLSGVHDPIAVKDCLETRPKKARQLIIIRPFDKLAELEKKKKEAEEKEKNEVLETTKRLFKPLKEKALEEETLEQEEADKGGDEEEEDLQSKDIYVFSYPYEGDFRRDLVKGAVRFQRRKVSAINHWIPRPESILFGRLKSMTQKSHNKPVPKKDEKKRLTARSQRIYDKFLERRERRKEDRRRRTQQTFDGEVIHYVRATLLFTHTYLRKRLYFPILIAAKNIGRTLLFQVPEWEQDWFNLEKESYLKCNYDGYELTDPDVPKKFLKEYIKEGIQIKIVYPFRLKPWYEPNEIEKKTTGYLTIYGTEIESPFGNPPDVPSFWEPIGEWIWNYTSDRAKPIIEPTRELIELIQKKSEAIKEKAEMVKEKVQTIKETVKKKINLDNRKKINLDNRKEINLDTRKEKIIRTKPTSNIKFSLEIVEDEPFSIQMKQNLDIPDPDDWTITMNDRINQMNEEYRFNLDIYNKLKADFKQRMDQPSPNIKSKLKKEWIRIKIWRSSLQKKTIRFIRKKLPFFMKVIHFRVKLLFIDLKISMFNMIESNLEFCMQLSRSFETIQKIFNSNHPISKNVESKCQGKEISQAYVFHQIWKEIRNMKGLCVKDLIESRASSPFIKKNVKEFLDSQGILDCKHPGELTINHWKQWLKWCAGYRIDPHRNKKRKHVIGNRLGWTEFASFLGEKRFATFMARLKNRIKRHRYDLLAYSYLDHMKENNHGPAIQYIPEPDYQAITNFQNPGFSKNKKKKKKKNDSSWKKFFSSKKKKKNCDSSKSKKRNVDFCAATKKNYYKKSRYYKFQFWLFPDLRKKIKNANKLGDVFPPNIIRRQIEEMWKFREIQVPKDFDVDAFVIESLRKQEEEKRRKAAAAQELQEARRKRKEERIQTREARRKKLESATSPEEVERLTRTFKLEDDLNKRERRKQAKKRLLKEQRVRQLAKIAAQKAKEQKREERKRKLAELNRKRKSSKRQKKNFRDFLVRDFCNIYYPKLNIDKINMEKEEVRLAIKEIILRQDAKKASQGDKKAWDRVKSKLDEKYQRGDDEKYKKGDERSETKTKPKKADEQEIDFRTAKTEYLKQQRRLQREAKRLAREEQLKEEMKLEGKEGVELEKDRLAYREMATNIYTWRMKYELEKLPLTPWVTKFRNAARFFDRKKLGGETEVANLLFPYAENGDLDFELLDTVLYLKSVFPKHNDIRRVFCEAARRSMPLVPGYFNDRFFVYKIASLLFKLKKKKIHVNLFDRSRRRINEKISSSFIFEDLFLPRRRREFRILNLLNLENNLDESVRSSSQEIPNDQGLMKKNEHLIVDTRQKIRRFLWPRYRLEDLICMNRFWWNTNNGSRSAMLRVRMYPKIDHWEHITNNLYFLKLKHSFISIREAVQKFGNHAKSLLDTKQSPVAGHNEALNEVKYKKEDSFCSISSSLPSDPSPYNELLTILRKLISELIDSIREWIGSLLSKLRDSIMEWISSLLSQLRAFLIKRISSLKDFIIKSMRELFSKLKLQLKRFLNPLKKKLRKWIDQKRRKWIDPLINKLKTQLINFRRFLRNLLNEIRNLLNEIRNLLNEIRNLLNEIRVKLVNFLRFLRDIIDGLLVKLEKPRRFSRWNKIQNCWNKIQNSRLISFIGKCSKIYQCYATYRYLVDFWRSSRR

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias210-224Basic residues
Compositional bias442-465Basic and acidic residues
Compositional bias1457-1475Basic residues
Compositional bias1655-1673Basic and acidic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
MH121052
EMBL· GenBank· DDBJ
AXP34404.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

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