A0A345HFH6 · A0A345HFH6_9POTV

Function

function

Involved in aphid transmission, cell-to-cell and systemis movement, encapsidation of the viral RNA and in the regulation of viral RNA amplification.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentviral capsid
Molecular FunctionRNA binding
Molecular FunctionRNA-dependent RNA polymerase activity
Biological ProcessDNA-templated transcription

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Genome polyprotein

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • Bardsir
  • Taxonomic lineage
    Viruses > Riboviria > Orthornavirae > Pisuviricota > Stelpaviricetes > Patatavirales > Potyviridae > Potyvirus

Accessions

  • Primary accession
    A0A345HFH6

Subcellular Location

Keywords

Family & Domains

Features

Showing features for domain, compositional bias, region.

TypeIDPosition(s)Description
Domain9-132RNA-directed RNA polymerase C-terminal
Compositional bias190-216Basic and acidic residues
Region190-250Disordered
Compositional bias217-243Polar residues

Sequence similarities

Belongs to the potyviridae genome polyprotein family.

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    475
  • Mass (Da)
    54,234
  • Last updated
    2018-11-07 v1
  • Checksum
    2DDEAFFDB14B8443
MFYTLLSLGVKEKEFQDVCTFFVNGDDLILAIHPDFEYLLDEFQGKFASLGLNYDFGSRTRDKEDLWFMSHRGLKIDGMYIPKLEPERVVSILEWDRSVEPVHRLEAICAAMIESWGYQELTHEIRKFYKWVLEQQPYCDLAKEGKAPYISEAALKMLYTSKEATQSEIQKYLDSFYAVDEEELDECEIRHQSGEAKDSTLDAGTETAKSKEKKEIPSQSTPSGSKPTSTQLTSGNRDQDLNAGTHGNIPVPRLKAISSKMKLPMANKKVVLNVEHLIQYEPDQRDLSNTRATSSQFNEWFNNVMKEYEVSETDMQIILNGFMVWCIENGTSPNINGVWVMMDGEEQVEYPLKPIVENAKPTLRQIMAHFSDAAEAYIEMRNRKQPYMPRYGQQRNLNDMGLARYAFDFYEVTSKTPNRAREAHHQMKAAALVGSRSKLFGIDGGGSTQEENTERHTAADVSANMHTLLGSSHPY

Features

Showing features for non-terminal residue, compositional bias.

TypeIDPosition(s)Description
Non-terminal residue1
Compositional bias190-216Basic and acidic residues
Compositional bias217-243Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
MF943137
EMBL· GenBank· DDBJ
AXG75366.1
EMBL· GenBank· DDBJ
Genomic RNA

Similar Proteins

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