A0A2S6C646 · A0A2S6C646_9PEZI

  • Protein
    ATP-dependent RNA helicase
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits. Binds 90S pre-ribosomal particles and dissociates from pre-60S ribosomal particles after processing of 27SB pre-rRNA. Required for the normal formation of 18S rRNA through the processing of pre-rRNAs at sites A0, A1 and A2, and the normal formation of 25S and 5.8S rRNAs through the processing of pre-rRNAs at sites C1 and C2.
RNA helicase.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

GO annotations

AspectTerm
Cellular Componentnucleolus
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular FunctionRNA binding
Molecular FunctionRNA helicase activity
Biological ProcessrRNA processing

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    ATP-dependent RNA helicase
  • EC number

Gene names

    • ORF names
      CBER1_05408

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • CBS538.71
  • Taxonomic lineage
    Eukaryota > Fungi > Dikarya > Ascomycota > Pezizomycotina > Dothideomycetes > Dothideomycetidae > Mycosphaerellales > Mycosphaerellaceae > Cercospora

Accessions

  • Primary accession
    A0A2S6C646

Proteomes

Subcellular Location

Interaction

Subunit

Component of pre-60S ribosomal complexes.

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain, region, compositional bias.

TypeIDPosition(s)Description
Domain46-259Helicase ATP-binding
Domain293-441Helicase C-terminal
Region544-616Disordered
Compositional bias569-616Basic and acidic residues

Domain

The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

Sequence similarities

Belongs to the DEAD box helicase family. DDX55/SPB4 subfamily.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    642
  • Mass (Da)
    72,351
  • Last updated
    2018-07-18 v1
  • Checksum
    89EDBF69A55D7587
MAQDTATEKKQPKSFEALTPELSQWILDFTTGMGFARTTPVQAMAIPLLMGNKDLVVEAVTGSGKTLSFLIPLVERILKAEEPNKRGYVRSIVVAPTKELASQIYDVLTGLLDFHKPSAAYLKQAAKPEVDSEDEEMEDVEVEQVPPGPYAVPQLLVGGRTKLAEDLATFSQLNSNILVGTPKRVLEVLQSSKVIIKRHWFDLLVLDEADRLLDANFQSDLQRILDIVPKERRTGLFSASVSEAVDELVRVGMRYPFKISAKVRSRSGALDKRTPESLKLYHLVTKQSLRIPHLKHILERSKAEKAILYVSTRAGVDYWNHILQPLLGMSVYPLHGDHKAAIRMKNLQRFRDSVSPAILLTTDVLARGIDIPDIDLVVQLDPPKQPKDFIHRCGRSGRAGKRGMAITFLSEGGEEDYVKYLSLQGTPLEPYPNPPNLSDADAKETIDAIRKVLIQKRELHDRSQKAFVSWIQAYSKTLPTDIFSVRRLDWVEAGKAWGLLRWPKMPELKRHFPVAATDRAHGLDLPADFDLNNVAYADKVHEAQRQADNEARARGEKPQLSSQLRGKLAAAKQRKEKAWTKQKGAKVVREERRERKEVRRKAENHSKMSEADKAKERELEALISKVRAQNAKAEEDFEGFDD

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias569-616Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
PNEN01000547
EMBL· GenBank· DDBJ
PPJ55183.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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