A0A2R8Y855 · A0A2R8Y855_HUMAN
- ProteinSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
- GeneSMARCE1
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids367 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Function
Features
Showing features for dna binding.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
DNA binding | 66-134 | HMG box | ||||
Sequence: PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYH |
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA binding |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionA0A2R8Y855
Proteomes
Organism-specific databases
Subcellular Location
Disease & Variants
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 427 variants from UniProt as well as other sources including ClinVar and dbSNP.
Genetic variation databases
PTM/Processing
Features
Showing features for modified residue (large scale data).
Type | ID | Position(s) | Source | Description | |||
---|---|---|---|---|---|---|---|
Modified residue (large scale data) | 136 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 204 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 265 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 314 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 316 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 317 | PRIDE | Phosphoserine | ||||
Sequence: S |
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain, coiled coil.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-18 | Pro residues | ||||
Sequence: MSKRPSYAPPPTPAPATQ | ||||||
Region | 1-23 | Disordered | ||||
Sequence: MSKRPSYAPPPTPAPATQMPSTP | ||||||
Compositional bias | 42-56 | Polar residues | ||||
Sequence: GGNPGTNSRVTASSG | ||||||
Region | 42-69 | Disordered | ||||
Sequence: GGNPGTNSRVTASSGITIPKPPKPPDKP | ||||||
Domain | 66-134 | HMG box | ||||
Sequence: PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYH | ||||||
Coiled coil | 105-136 | |||||
Sequence: RDLTDEEKQEYLNEYEAEKIEYNESMKAYHNS | ||||||
Region | 153-175 | Disordered | ||||
Sequence: LEEESRQRQSRMEKGEPYMSIQP | ||||||
Coiled coil | 224-258 | |||||
Sequence: MQVLKRQVQSLMVHQRKLEAELLQIEERHQEKKRK | ||||||
Compositional bias | 296-311 | Basic and acidic residues | ||||
Sequence: ARKRQEEREKEAAEQA | ||||||
Region | 296-348 | Disordered | ||||
Sequence: ARKRQEEREKEAAEQAERSQSSIVPEEEQAANKGEEKKDDENIPMETGNPLAT | ||||||
Compositional bias | 324-339 | Basic and acidic residues | ||||
Sequence: QAANKGEEKKDDENIP |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length367
- Mass (Da)41,874
- Last updated2018-06-20 v1
- ChecksumDE687009C28726E9
Computationally mapped potential isoform sequences
There are 19 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q969G3 | SMCE1_HUMAN | SMARCE1 | 411 | ||
J3KT85 | J3KT85_HUMAN | SMARCE1 | 109 | ||
A0A2R8Y7U4 | A0A2R8Y7U4_HUMAN | SMARCE1 | 297 | ||
A0A2R8Y7I9 | A0A2R8Y7I9_HUMAN | SMARCE1 | 332 | ||
A0A2R8Y765 | A0A2R8Y765_HUMAN | SMARCE1 | 277 | ||
A0A2R8Y4T4 | A0A2R8Y4T4_HUMAN | SMARCE1 | 335 | ||
A0A2R8YEB8 | A0A2R8YEB8_HUMAN | SMARCE1 | 96 | ||
A0A2R8YDQ4 | A0A2R8YDQ4_HUMAN | SMARCE1 | 55 | ||
A0A2R8YDD9 | A0A2R8YDD9_HUMAN | SMARCE1 | 51 | ||
A0A2R8YD78 | A0A2R8YD78_HUMAN | SMARCE1 | 115 | ||
A0A2R8YFC8 | A0A2R8YFC8_HUMAN | SMARCE1 | 58 | ||
A0A2R8YES3 | A0A2R8YES3_HUMAN | SMARCE1 | 347 | ||
A0A2U3TZQ7 | A0A2U3TZQ7_HUMAN | SMARCE1 | 311 | ||
B4DGM3 | B4DGM3_HUMAN | SMARCE1 | 393 | ||
J3QKX6 | J3QKX6_HUMAN | SMARCE1 | 135 | ||
J3QKS7 | J3QKS7_HUMAN | SMARCE1 | 287 | ||
J3QL66 | J3QL66_HUMAN | SMARCE1 | 77 | ||
J3QR61 | J3QR61_HUMAN | SMARCE1 | 259 | ||
J3QS32 | J3QS32_HUMAN | SMARCE1 | 52 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-18 | Pro residues | ||||
Sequence: MSKRPSYAPPPTPAPATQ | ||||||
Compositional bias | 42-56 | Polar residues | ||||
Sequence: GGNPGTNSRVTASSG | ||||||
Compositional bias | 296-311 | Basic and acidic residues | ||||
Sequence: ARKRQEEREKEAAEQA | ||||||
Compositional bias | 324-339 | Basic and acidic residues | ||||
Sequence: QAANKGEEKKDDENIP |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AC004585 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC073508 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. |