A0A2R8PVB4 · A0A2R8PVB4_DANRE
- ProteinZinc finger MYND domain-containing protein 11 isoform X1
- Genezmynd11
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids629 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA binding | |
Molecular Function | metal ion binding | |
Molecular Function | methylated histone binding | |
Molecular Function | transcription corepressor activity | |
Biological Process | negative regulation of BMP signaling pathway | |
Biological Process | regulation of signal transduction | |
Biological Process | regulation of transcription elongation by RNA polymerase II | |
Biological Process | SMAD protein signal transduction |
Keywords
- Molecular function
- Ligand
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio
Accessions
- Primary accessionA0A2R8PVB4
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
PTM/Processing
Keywords
- PTM
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for domain, compositional bias, region, coiled coil.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 6-82 | SAMD1-like winged helix (WH) | ||||
Sequence: KKRQADPKVVQYVWSAIEVIRNQKQIANMDRISKYLSRVYGMHPKDTARQLVLAVKDGLVVETLTVGCKGSKAGIEQ | ||||||
Domain | 108-156 | PHD-type | ||||
Sequence: DWYCFECHLPGDVMECDGCFRVYHLRCVSEDHRPRDTTSHWQCGICRGS | ||||||
Domain | 194-246 | Bromo | ||||
Sequence: PIYKRLIHTPLDVENIQENISDGKYKSFEEFRADAQLIVHNTAILHGVNSDQT | ||||||
Domain | 288-339 | PWWP | ||||
Sequence: NHELVWARMKGFGYWPAKVMQREGNQVDVRFFGHQHQRAWIPSDNIQDITVS | ||||||
Compositional bias | 371-396 | Basic and acidic residues | ||||
Sequence: WKGKPEEKNDRSERHERQEERQEEAE | ||||||
Region | 371-480 | Disordered | ||||
Sequence: WKGKPEEKNDRSERHERQEERQEEAESSISSTSNEQSRVNQEPKAKKSRRSQVAEPKEEEPEPEMEAVSSSQEIPTAVPHQPERMSVSTQTKKSSSPSSSSSPAPRMIHK | ||||||
Compositional bias | 410-428 | Basic and acidic residues | ||||
Sequence: NQEPKAKKSRRSQVAEPKE | ||||||
Compositional bias | 439-480 | Polar residues | ||||
Sequence: SSSQEIPTAVPHQPERMSVSTQTKKSSSPSSSSSPAPRMIHK | ||||||
Coiled coil | 511-587 | |||||
Sequence: AENKRETERVLKEALDKLRGEMEEEKRQAVNKAVSSTQAEMERKCKQVKEKCKEELMEEMKKMVSQHKQLLSQTKKK | ||||||
Domain | 590-625 | MYND-type | ||||
Sequence: CYNCEEEAMYHCCWNTSYCSIKCQQEHWHADHKRTC |
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length629
- Mass (Da)73,571
- Last updated2018-06-20 v1
- ChecksumD864690ADF56C18B
Computationally mapped potential isoform sequences
There are 4 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q08CT0 | Q08CT0_DANRE | zmynd11 | 640 | ||
Q503P6 | Q503P6_DANRE | zmynd11 | 85 | ||
A0A8M9PXI9 | A0A8M9PXI9_DANRE | zmynd11 | 464 | ||
A0A8M9PG15 | A0A8M9PG15_DANRE | zmynd11 | 621 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 371-396 | Basic and acidic residues | ||||
Sequence: WKGKPEEKNDRSERHERQEERQEEAE | ||||||
Compositional bias | 410-428 | Basic and acidic residues | ||||
Sequence: NQEPKAKKSRRSQVAEPKE | ||||||
Compositional bias | 439-480 | Polar residues | ||||
Sequence: SSSQEIPTAVPHQPERMSVSTQTKKSSSPSSSSSPAPRMIHK |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
BX571689 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. |