A0A2R6X3V3 · A0A2R6X3V3_MARPO
- ProteinRRM domain-containing protein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids613 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | RNA binding | |
Biological Process | mRNA processing | |
Biological Process | RNA splicing |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended nameRRM domain-containing protein
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Marchantiophyta > Marchantiopsida > Marchantiidae > Marchantiales > Marchantiaceae > Marchantia
Accessions
- Primary accessionA0A2R6X3V3
Proteomes
Genome annotation databases
Subcellular Location
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-115 | Basic and acidic residues | ||||
Sequence: MAGDDDDRYGSDLRDSPPVRSRSYHRSPDDDGREGSPPDIREGRENGDRYRERMPREDDRSKDRIREDGGHRERRRREDRGDRERDRDRGDRERRHRDDGDRDRVERERSRHDHD | ||||||
Region | 1-160 | Disordered | ||||
Sequence: MAGDDDDRYGSDLRDSPPVRSRSYHRSPDDDGREGSPPDIREGRENGDRYRERMPREDDRSKDRIREDGGHRERRRREDRGDRERDRDRGDRERRHRDDGDRDRVERERSRHDHDRDRERRHRHRSRSRSQGRSRDRRSRSRSRSRDRKSKRTSGFDMAP | ||||||
Compositional bias | 116-149 | Basic residues | ||||
Sequence: RDRERRHRHRSRSRSQGRSRDRRSRSRSRSRDRK | ||||||
Domain | 243-326 | RRM | ||||
Sequence: RRVYVGGLPPMANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINQEKRFAFVEMRTVEEASNAMALDGIIYEGVSVRVRRPSD | ||||||
Domain | 363-441 | RRM | ||||
Sequence: DRIFVGGLPYYLSEEQIMDLLSSFGPLRAFDLVKDRDTGNSKGYGFCVYQDPSVMDIACAALNGLKMGDRTLTVRRASA |
Sequence similarities
Belongs to the splicing factor SR family.
Family and domain databases
Sequence
- Sequence statusComplete
- Length613
- Mass (Da)66,769
- Last updated2018-06-20 v1
- Checksum9AC4329CB1684BE8
Computationally mapped potential isoform sequences
There are 7 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A2R6X3W7 | A0A2R6X3W7_MARPO | MARPO_0038s0101 | 617 | ||
A0A2R6X3U4 | A0A2R6X3U4_MARPO | MARPO_0038s0101 | 598 | ||
A0A2R6X3V0 | A0A2R6X3V0_MARPO | MARPO_0038s0101 | 583 | ||
A0A2R6X3V1 | A0A2R6X3V1_MARPO | MARPO_0038s0101 | 602 | ||
A0A2R6X3V5 | A0A2R6X3V5_MARPO | MARPO_0038s0101 | 598 | ||
A0A2R6X3W5 | A0A2R6X3W5_MARPO | MARPO_0038s0101 | 602 | ||
A0A2R6X3X2 | A0A2R6X3X2_MARPO | MARPO_0038s0101 | 587 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-115 | Basic and acidic residues | ||||
Sequence: MAGDDDDRYGSDLRDSPPVRSRSYHRSPDDDGREGSPPDIREGRENGDRYRERMPREDDRSKDRIREDGGHRERRRREDRGDRERDRDRGDRERRHRDDGDRDRVERERSRHDHD | ||||||
Compositional bias | 116-149 | Basic residues | ||||
Sequence: RDRERRHRHRSRSRSQGRSRDRRSRSRSRSRDRK |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
KZ772710 EMBL· GenBank· DDBJ | PTQ40783.1 EMBL· GenBank· DDBJ | Genomic DNA |