A0A2K6R345 · A0A2K6R345_RHIRO

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentadherens junction
Cellular Componentfocal adhesion
Cellular Componentnucleoplasm
Cellular ComponentP-body
Cellular Componentplasma membrane
Cellular ComponentRISC complex
Molecular Functionmetal ion binding
Biological Processcell migration
Biological Processcytoskeleton organization
Biological ProcessmiRNA-mediated gene silencing by inhibition of translation
Biological Processnegative regulation of DNA-templated transcription
Biological Processnegative regulation of hippo signaling
Biological ProcessP-body assembly
Biological Processphosphorylation
Biological Processregulation of cell shape
Biological Processresponse to hypoxia

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    LIM domain-containing protein 1

Gene names

    • Name
      LIMD1

Organism names

Accessions

  • Primary accession
    A0A2K6R345

Proteomes

Subcellular Location

Keywords

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region66-87Disordered
Region99-167Disordered
Region210-387Disordered
Compositional bias226-274Polar residues
Compositional bias338-358Polar residues
Domain468-529LIM zinc-binding

Sequence similarities

Belongs to the zyxin/ajuba family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    545
  • Mass (Da)
    57,198
  • Last updated
    2018-03-28 v1
  • Checksum
    2391A58D09FE6D03
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKGAGNNPEFEETRRVFATKMAKIHLQQQLLQEETLPRGSRGPVNGGGRLGPQTRREVGVGSRLTVDGAAKPPLAASSGPPGAVTTFAAGQPPYPPQEQRSRPYLHGTRHGSQDCGSRESPATSEMSALHQPGPCEDPSCLTHGDYYDNLSLASPKWGDKPGVSPSIGLSVGSGWPSSLGSDPLLPKPCGDHPLNQRQLSLSSSRSSEGSLGGQDSGIGGRSSEKPTGLWSTASSQRVSPGLPSPNLENGAPALGPAQPRTPSVSAPLALSCPRQGGLPRSNSGLGGEVSGVMSKPNVAPQPWFQDGPKSYLSSSAPSSSPTGLDSSQPGAVPGLGPKPGCTDLGTGPKLSPTSLVHPVMSTLPELSCKEGTLGWSSDGSLGPVLLESPSSPRVRLPCQPLVPGPELRPSAAELKLEALTQRLEREMDAHPKADYFGACVKCSKGVFGAGQACQAMGNLYHDTCFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDM

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias226-274Polar residues
Compositional bias338-358Polar residues

Keywords

Sequence databases

Genome annotation databases

Similar Proteins

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