A0A2K4FQZ3 · A0A2K4FQZ3_9PSED

  • Protein
    Deoxyribodipyrimidine photo-lyase
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    2/5

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Cofactor

Protein has several cofactor binding sites:
(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate (UniProtKB | Rhea| CHEBI:15636 )

FAD (UniProtKB | Rhea| CHEBI:57692 )

Note: Binds 1 FAD per subunit.

Features

Showing features for binding site, site.

148350100150200250300350400450
Type
IDPosition(s)Description
Binding site224FAD (UniProtKB | ChEBI)
Binding site236-240FAD (UniProtKB | ChEBI)
Binding site275FAD (UniProtKB | ChEBI)
Binding site278-285FAD (UniProtKB | ChEBI)
Site310Electron transfer via tryptophanyl radical
Site363Electron transfer via tryptophanyl radical
Binding site376-378FAD (UniProtKB | ChEBI)
Site386Electron transfer via tryptophanyl radical

GO annotations

AspectTerm
Molecular Functiondeoxyribodipyrimidine photo-lyase activity
Molecular FunctionDNA binding
Molecular FunctionFAD binding
Biological Processnucleobase-containing compound metabolic process
Biological Processresponse to light stimulus
Biological Processresponse to stress

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Deoxyribodipyrimidine photo-lyase

Gene names

    • ORF names
      C1892_14700

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • MPBD7-1
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Accessions

  • Primary accession
    A0A2K4FQZ3

Proteomes

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain1-132Photolyase/cryptochrome alpha/beta

Sequence similarities

Belongs to the DNA photolyase class-1 family.
Belongs to the DNA photolyase family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    483
  • Mass (Da)
    54,963
  • Last updated
    2018-03-28 v1
  • MD5 Checksum
    187AC04206C8FF2F582677AF8506C85E
MQLIWLRSDLRLHDNTALAAAAAQGPCVAVYLTSPEQWRAHDDAPCKIDFWLRNLGVLSVALNELNIPLLIREATHWHQAPRVLLKLCRELNVATVHVNEEYGLNETQRDTEVARALNDQGIEFHRHLDQLLFRPGSVLTKTGNYFQVFSQFRKVCYNRLHFSLPSLVATPRQQASTGIARDPVPTHVDGFAPPSETLRAFWPAGETEARRRLDSFVDQHLDDYQHERDFPARPGTSQLSAYLVAGVVSPRQCLHAALQANRGEFESGSAGAVTWINELLWREFYKHILVGYPRVSRHRAFRPETEALAWRKAPGELEAWKQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLLIDWREGERFFMQHLIDGDLAANNGGWQWSASTGTDSAPWFRIFNPLSQSEKFDREGLFIKYWLPELNDLDRQQVHNPNTQGGLFGAVDYPAPIVDLRESRARALAAFRNLPTRQDAAVEGVGD

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
PPRZ01000055
EMBL· GenBank· DDBJ
POA13703.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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