A0A2I4CSA7 · A0A2I4CSA7_AUSLI
- ProteinFragile X mental retardation syndrome-related protein 1 homolog B-like isoform X1
- GeneLOC106531534
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1188 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasmic ribonucleoprotein granule | |
Cellular Component | dendritic filopodium | |
Cellular Component | dendritic spine neck | |
Cellular Component | growth cone | |
Cellular Component | membrane | |
Cellular Component | neuronal cell body | |
Cellular Component | nucleus | |
Cellular Component | postsynaptic density | |
Cellular Component | presynapse | |
Molecular Function | mRNA 3'-UTR binding | |
Molecular Function | protein homodimerization activity | |
Molecular Function | translation regulator activity | |
Biological Process | muscle organ development | |
Biological Process | negative regulation of translation | |
Biological Process | positive regulation of protein phosphorylation | |
Biological Process | positive regulation of translation | |
Biological Process | regulation of alternative mRNA splicing, via spliceosome | |
Biological Process | regulation of filopodium assembly | |
Biological Process | regulation of mRNA stability |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Neoteleostei > Acanthomorphata > Ovalentaria > Atherinomorphae > Cyprinodontiformes > Rivulidae > Austrofundulus
Accessions
- Primary accessionA0A2I4CSA7
Proteomes
Subcellular Location
UniProt Annotation
GO Annotation
Keywords
- Cellular component
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for domain, repeat, coiled coil, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 118-200 | S1 motif | ||||
Sequence: GDIVVGRINNIREYGFFLTLLCMAGGLKRDIEDLELSALCHIREIPSSSSHDDPLSYYQVGDLIRGGVKDIDRYQEKITVSLH | ||||||
Repeat | 333-366 | TPR | ||||
Sequence: VEALVARGALYANKGSIMKAISDFELALENCPDH | ||||||
Domain | 458-504 | Agenet-like | ||||
Sequence: LAVEVRGSNGAYYKGFVKDIHDDSLTIAFENNWQPERQVPFSDVRLP | ||||||
Domain | 517-569 | Agenet-like | ||||
Sequence: EEVEIFSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPV | ||||||
Coiled coil | 810-837 | |||||
Sequence: HISYLNDMAELLAESQQLEEDLKKVVDY | ||||||
Region | 877-1188 | Disordered | ||||
Sequence: QVTQGHRAVDRERGDRGDRGERGAYNTDSGANASSSISGSRSYNGRGRGRRGYNYNTGYGTNSEQSNASETDSERKEELSDWSLAGEDQDGERERGSRPQRDGRRRPGPGRGRGGPGGRGRGGRGGYSNSYAPRDQENYHPYGTMEANTETDQTADTDASESNLPANRRRRSRRRRTDEDATLIDGMSESDNASVSENGTERSEAKPQRRNRSRRRRNRLPEERQPVTVADYISRAESQSRQMMAKDTKKNKDVGQVEVIDEHSPQSVPPTTNGSNNGVSDTSSSSATKAPRSSADKPAEVSSPQPVLNGLS | ||||||
Compositional bias | 879-899 | Basic and acidic residues | ||||
Sequence: TQGHRAVDRERGDRGDRGERG | ||||||
Compositional bias | 903-919 | Polar residues | ||||
Sequence: TDSGANASSSISGSRSY | ||||||
Compositional bias | 945-985 | Basic and acidic residues | ||||
Sequence: SETDSERKEELSDWSLAGEDQDGERERGSRPQRDGRRRPGP | ||||||
Compositional bias | 1018-1038 | Polar residues | ||||
Sequence: YGTMEANTETDQTADTDASES | ||||||
Compositional bias | 1039-1059 | Basic and acidic residues | ||||
Sequence: NLPANRRRRSRRRRTDEDATL | ||||||
Compositional bias | 1063-1077 | Polar residues | ||||
Sequence: MSESDNASVSENGTE | ||||||
Compositional bias | 1118-1135 | Basic and acidic residues | ||||
Sequence: QMMAKDTKKNKDVGQVEV | ||||||
Compositional bias | 1141-1168 | Polar residues | ||||
Sequence: PQSVPPTTNGSNNGVSDTSSSSATKAPR |
Sequence similarities
Belongs to the FMR1 family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,188
- Mass (Da)133,364
- Last updated2018-02-28 v1
- Checksum35CBD62A0C54D2AD
Computationally mapped potential isoform sequences
There are 8 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A2I4CSA8 | A0A2I4CSA8_AUSLI | LOC106531534 | 1187 | ||
A0A2I4CSB0 | A0A2I4CSB0_AUSLI | LOC106531534 | 1162 | ||
A0A2I4CSB1 | A0A2I4CSB1_AUSLI | LOC106531534 | 1186 | ||
A0A2I4CSB2 | A0A2I4CSB2_AUSLI | LOC106531534 | 1142 | ||
A0A2I4CSB3 | A0A2I4CSB3_AUSLI | LOC106531534 | 459 | ||
A0A2I4CSB6 | A0A2I4CSB6_AUSLI | LOC106531534 | 772 | ||
A0A2I4CSB8 | A0A2I4CSB8_AUSLI | LOC106531534 | 1143 | ||
A0A2I4CSC3 | A0A2I4CSC3_AUSLI | LOC106531534 | 1116 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 879-899 | Basic and acidic residues | ||||
Sequence: TQGHRAVDRERGDRGDRGERG | ||||||
Compositional bias | 903-919 | Polar residues | ||||
Sequence: TDSGANASSSISGSRSY | ||||||
Compositional bias | 945-985 | Basic and acidic residues | ||||
Sequence: SETDSERKEELSDWSLAGEDQDGERERGSRPQRDGRRRPGP | ||||||
Compositional bias | 1018-1038 | Polar residues | ||||
Sequence: YGTMEANTETDQTADTDASES | ||||||
Compositional bias | 1039-1059 | Basic and acidic residues | ||||
Sequence: NLPANRRRRSRRRRTDEDATL | ||||||
Compositional bias | 1063-1077 | Polar residues | ||||
Sequence: MSESDNASVSENGTE | ||||||
Compositional bias | 1118-1135 | Basic and acidic residues | ||||
Sequence: QMMAKDTKKNKDVGQVEV | ||||||
Compositional bias | 1141-1168 | Polar residues | ||||
Sequence: PQSVPPTTNGSNNGVSDTSSSSATKAPR |
Keywords
- Technical term