A0A2I1EEC1 · A0A2I1EEC1_9GLOM

  • Protein
    Frequency clock protein
  • Gene
    SJFRQ
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Evidence at transcript level
  • Annotation score
    1/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentnucleus
Molecular FunctionRNA binding
Biological Processcircadian rhythm
Biological Processregulation of DNA-templated transcription

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Frequency clock protein

Gene names

    • Name
      SJFRQ
    • ORF names
      RhiirA1_417071
      , RhiirA5_345339

Organism names

  • Taxonomic identifier
  • Organism
  • Strains
    • A5
    • A1
    • DAOM 197198
  • Taxonomic lineage
    Eukaryota > Fungi > Fungi incertae sedis > Mucoromycota > Glomeromycotina > Glomeromycetes > Glomerales > Glomeraceae > Rhizophagus

Accessions

  • Primary accession
    A0A2I1EEC1

Proteomes

Organism-specific databases

Subcellular Location

Family & Domains

Features

Showing features for compositional bias, region, domain.

TypeIDPosition(s)Description
Compositional bias1-28Polar residues
Region1-86Disordered
Compositional bias46-86Polar residues
Region237-256Disordered
Domain267-359HTH La-type RNA-binding
Region360-403Disordered
Compositional bias363-403Polar residues
Compositional bias418-439Polar residues
Region418-470Disordered
Compositional bias447-468Polar residues
Region491-511Disordered
Compositional bias495-511Polar residues
Region664-784Disordered
Compositional bias676-726Polar residues
Compositional bias736-784Polar residues

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    914
  • Mass (Da)
    102,309
  • Last updated
    2018-02-28 v1
  • Checksum
    25D75BCF4B3CAF9F
MSSLETTKLGDNITKLPINSTTTVEKCESSSLTKREIDAEDSEMNLFLSDESSGNDQEMDEASGETSGETSNGSNSSNSKKSNSSISTMEAWFREFNQNTKELNKNNFDDDDSETPYYVNSYKTHPKHPKHPKLVSNQQPSLISRHQHSQRTGHHAVSNHGNFHEKCEESSGSDSYRSVIDDLTLKNQKLRQKLRKLERIHSKSLHKEKLFEVRYYQMPRGKRHELEEYLRQFAAQLSTPNSSSTQNSTNVNDSTENSLSLDTLSIKASDKSKMKQVVRAIENVFTTKPSLDDHYLKDQEDADPQGYVYLNLLTNMAQLHTMSVTLPFVKQAIRTFSNCLELNEDDTKVRWRTGLDHIKPDQFSLSGGSSENLSRNGGVSEISSSTGDKQSDSSPSNPLSESIQNYSLDQKNSANAYITPSSLTSSNTNNQQVKSTPQITHYRPVFLHRNASSSSSSSNETNSENDQHDGPVIYYEGGLFCTDFSRDVIMDDDDKPTTSSGTQSSPALDNSIEDDNIDIFKERWNIPHYKRATNSILGGNNTILMEISDIGQETDESLTKLCDICGHNDHCSLSCSHISVDNTMIAVDDRHKVNSIGINDGLNKILMEKDIEFNHQSEKNYGEINDWNDQVSKCIPDYKRLHTTKVPGIITEDNFMLLVQTSHPPEKKISRSKESLVDNEINLSSSSNSSNSSSTDMGQQNNERPQQSSKSHKIISTKLFQLPPSMSPQPRTSPPPGVRRTSFATRSKTSSSDSGGSSGYGSSSSPYSNNFSEPSSSETSRDNSYLLKNNTLLQLSRSNNTNSKCSQYDEIQDMELDSLSSDSSDPSPFINIDADEDEELEVKDNENNKCRKNRVEESVLGMNLRLQDAAIEERRKLADKAAPQEQRTMVSKVSSVKNIIFCSFFWIIIIIIIV

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-28Polar residues
Compositional bias46-86Polar residues
Compositional bias363-403Polar residues
Compositional bias418-439Polar residues
Compositional bias447-468Polar residues
Compositional bias495-511Polar residues
Compositional bias676-726Polar residues
Compositional bias736-784Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
LC350022
EMBL· GenBank· DDBJ
BBC20654.1
EMBL· GenBank· DDBJ
mRNA
LLXJ01000001
EMBL· GenBank· DDBJ
PKC18002.1
EMBL· GenBank· DDBJ
Genomic DNA
LLXH01000339
EMBL· GenBank· DDBJ
PKC68313.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp