A0A2H9SJE7 · A0A2H9SJE7_9BACT

  • Protein
    Transcription termination factor Rho
  • Gene
    rho
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.
The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Features

Showing features for binding site.

145850100150200250300350400450
TypeIDPosition(s)Description
Binding site209-214ATP (UniProtKB | ChEBI)
Binding site221-226ATP (UniProtKB | ChEBI)
Binding site252ATP (UniProtKB | ChEBI)

GO annotations

AspectTerm
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular FunctionATP-dependent activity, acting on RNA
Molecular Functionhelicase activity
Molecular FunctionRNA binding
Biological ProcessDNA-templated transcription termination

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Transcription termination factor Rho
  • EC number
  • Alternative names
    • ATP-dependent helicase Rho

Gene names

    • Name
      rho
    • ORF names
      CK425_12275

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • BC.030
  • Taxonomic lineage
    Bacteria > Chlamydiota > Chlamydiia > Parachlamydiales > Parachlamydiaceae > Parachlamydia

Accessions

  • Primary accession
    A0A2H9SJE7

Proteomes

Interaction

Subunit

Homohexamer. The homohexamer assembles into an open ring structure.

Family & Domains

Features

Showing features for compositional bias, region, domain.

Type
IDPosition(s)Description
Compositional bias1-15Basic and acidic residues
Region1-36Disordered
Compositional bias16-36Polar residues
Domain91-166Rho RNA-BD

Sequence similarities

Belongs to the Rho family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    458
  • Mass (Da)
    51,304
  • Last updated
    2018-02-28 v1
  • Checksum
    4CDD4F96C3BA08B3
MNLENTHEESSSNEETTTSEKMLESQSPGDSSKEQEQIVGEITRIADIQRMNIDQLNQYGKKIGLKHLGSLTKSQMVFEIVKAISENPNEILYGEGVLEVLPDGFGFLRSPNYNYLPSAEDIYVSPAQIRRFDLKKGDTVCGTIRPPKDKEKYFALLKVDKINGKSPEKAKERILFENLTPLYPNERIVMETTRDKLSTRVLDLAAPIGKGQRGLIVAPPRSGKTMILQSIANSIATNNPEIVLIVLLIDERPEEVTDMQRIVVGEVISSTFDEPPERHVQVAEMAIEKARRLVEHGRDVVILLDSITRLARAYNTIQPHSGKILTGGIDANALHKPKRFFGAARNIEQGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLADRRIYPAIDLIKSGTRKEELLYHPNELEKIYLLRQAVADLASVDAMNLLLGRLKKTNSNVEFLLSMKD

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-15Basic and acidic residues
Compositional bias16-36Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
PEQL01000028
EMBL· GenBank· DDBJ
PJD93847.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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