A0A2H1ZE94 · A0A2H1ZE94_ARATH
- ProteinVoltage dependent anion channel 2
- GeneVDAC2
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids305 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score1/5
Variants
Variant ID(s) | Position(s) | Change | Description | Clinical significance | Provenance | ||
---|---|---|---|---|---|---|---|
tmp_5_26935529_T_G | 26 | D>E | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.02) Somatic: No Accession: 5:g.26935529T>G Codon: GAT/GAG Consequence type: missense Cytogenetic band: Genomic location: 5:g.26935529T>G Locations: - p.Asp26Glu (EnsemblPlants:AT5G67500.1) - c.78T>G (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH12967331 | 45 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.05) Somatic: No Accession: 5:g.26936163G>A Codon: GCT/ACT Consequence type: missense Cytogenetic band: Genomic location: 5:g.26936163G>A Locations: - p.Ala45Thr (EnsemblPlants:AT5G67500.1) - c.133G>A (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
tmp_5_26936243_C_G | 71 | I>M | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 5:g.26936243C>G Codon: ATC/ATG Consequence type: missense Cytogenetic band: Genomic location: 5:g.26936243C>G Locations: - p.Ile71Met (EnsemblPlants:AT5G67500.1) - c.213C>G (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
tmp_5_26936534_A_T | 109 | Q>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 5:g.26936534A>T Codon: CAA/CTA Consequence type: missense Cytogenetic band: Genomic location: 5:g.26936534A>T Locations: - p.Gln109Leu (EnsemblPlants:AT5G67500.1) - c.326A>T (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
tmp_5_26936550_C_G | 114 | H>Q | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 5:g.26936550C>G Codon: CAC/CAG Consequence type: missense Cytogenetic band: Genomic location: 5:g.26936550C>G Locations: - p.His114Gln (EnsemblPlants:AT5G67500.1) - c.342C>G (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH12967357 | 129 | I>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (1) Somatic: No Accession: 5:g.26936593A>G Codon: ATT/GTT Consequence type: missense Cytogenetic band: Genomic location: 5:g.26936593A>G Locations: - p.Ile129Val (EnsemblPlants:AT5G67500.1) - c.385A>G (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
tmp_5_26936656_A_C | 150 | T>P | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 5:g.26936656A>C Codon: ACA/CCA Consequence type: missense Cytogenetic band: Genomic location: 5:g.26936656A>C Locations: - p.Thr150Pro (EnsemblPlants:AT5G67500.1) - c.448A>C (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH00757568 | 154 | T>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.18) Somatic: No Accession: 5:g.26936668A>G Codon: ACT/GCT Consequence type: missense Cytogenetic band: Genomic location: 5:g.26936668A>G Locations: - p.Thr154Ala (EnsemblPlants:AT5G67500.1) - c.460A>G (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH12967360 | 173 | I>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.45) Somatic: No Accession: 5:g.26936725A>G Codon: ATA/GTA Consequence type: missense Cytogenetic band: Genomic location: 5:g.26936725A>G Locations: - p.Ile173Val (EnsemblPlants:AT5G67500.1) - c.517A>G (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH00757570 | 214 | T>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.03) Somatic: No Accession: 5:g.26936932A>G Codon: ACG/GCG Consequence type: missense Cytogenetic band: Genomic location: 5:g.26936932A>G Locations: - p.Thr214Ala (EnsemblPlants:AT5G67500.1) - c.640A>G (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH07495442 | 269 | N>D | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.11) Somatic: No Accession: 5:g.26937537A>G Codon: AAT/GAT Consequence type: missense Cytogenetic band: Genomic location: 5:g.26937537A>G Locations: - p.Asn269Asp (EnsemblPlants:AT5G67500.1) - c.805A>G (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
tmp_5_26937542_T_A | 270 | D>E | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.23) Somatic: No Accession: 5:g.26937542T>A Codon: GAT/GAA Consequence type: missense Cytogenetic band: Genomic location: 5:g.26937542T>A Locations: - p.Asp270Glu (EnsemblPlants:AT5G67500.1) - c.810T>A (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH12967402 | 270 | D>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.54) Somatic: No Accession: 5:g.26937540G>A Codon: GAT/AAT Consequence type: missense Cytogenetic band: Genomic location: 5:g.26937540G>A Locations: - p.Asp270Asn (EnsemblPlants:AT5G67500.1) - c.808G>A (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
tmp_5_26937543_A_G | 271 | R>G | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.01) Somatic: No Accession: 5:g.26937543A>G Codon: AGG/GGG Consequence type: missense Cytogenetic band: Genomic location: 5:g.26937543A>G Locations: - p.Arg271Gly (EnsemblPlants:AT5G67500.1) - c.811A>G (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH03489164 | 274 | Q>* | 1000Genomes | ||||
Consequence: stop gained Somatic: No Accession: 5:g.26937552C>T Codon: CAA/TAA Consequence type: stop gained Cytogenetic band: Genomic location: 5:g.26937552C>T Locations: - p.Gln274Ter (EnsemblPlants:AT5G67500.1) - c.820C>T (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH12967403 | 278 | V>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.03) Somatic: No Accession: 5:g.26937564G>C Codon: GTT/CTT Consequence type: missense Cytogenetic band: Genomic location: 5:g.26937564G>C Locations: - p.Val278Leu (EnsemblPlants:AT5G67500.1) - c.832G>C (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH12967404 | 280 | T>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0) Somatic: No Accession: 5:g.26937571C>T Codon: ACA/ATA Consequence type: missense Cytogenetic band: Genomic location: 5:g.26937571C>T Locations: - p.Thr280Ile (EnsemblPlants:AT5G67500.1) - c.839C>T (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH12967415 | 285 | G>D | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.26) Somatic: No Accession: 5:g.26937586G>A Codon: GGT/GAT Consequence type: missense Cytogenetic band: Genomic location: 5:g.26937586G>A Locations: - p.Gly285Asp (EnsemblPlants:AT5G67500.1) - c.854G>A (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
tmp_5_26937613_A_C | 294 | E>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.02) Somatic: No Accession: 5:g.26937613A>C Codon: GAG/GCG Consequence type: missense Cytogenetic band: Genomic location: 5:g.26937613A>C Locations: - p.Glu294Ala (EnsemblPlants:AT5G67500.1) - c.881A>C (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH03489166 | 300 | R>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0) Somatic: No Accession: 5:g.26937631G>C Codon: AGA/ACA Consequence type: missense Cytogenetic band: Genomic location: 5:g.26937631G>C Locations: - p.Arg300Thr (EnsemblPlants:AT5G67500.1) - c.899G>C (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH07495445 | 303 | Q>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.13) Somatic: No Accession: 5:g.26937639C>A Codon: CAA/AAA Consequence type: missense Cytogenetic band: Genomic location: 5:g.26937639C>A Locations: - p.Gln303Lys (EnsemblPlants:AT5G67500.1) - c.907C>A (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: | |||||||
ENSVATH14653176 | 304 | Y>* | 1000Genomes | ||||
Consequence: stop gained Somatic: No Accession: 5:g.26937644T>A Codon: TAT/TAA Consequence type: stop gained Cytogenetic band: Genomic location: 5:g.26937644T>A Locations: - p.Tyr304Ter (EnsemblPlants:AT5G67500.1) - c.912T>A (EnsemblPlants:AT5G67500.1) Source type: large scale study Cross-references: |