A0A2D6D8F5 · A0A2D6D8F5_9GAMM

  • Protein
    Ion-translocating oxidoreductase complex subunit B
  • Gene
    rnfB
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.
The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Cofactor

[4Fe-4S] cluster (UniProtKB | Rhea| CHEBI:49883 )

Note: Binds 3 [4Fe-4S] clusters.

Features

Showing features for binding site.

119820406080100120140160180
TypeIDPosition(s)Description
Binding site49[4Fe-4S] cluster 1 (UniProtKB | ChEBI)
Binding site52[4Fe-4S] cluster 1 (UniProtKB | ChEBI)
Binding site57[4Fe-4S] cluster 1 (UniProtKB | ChEBI)
Binding site73[4Fe-4S] cluster 1 (UniProtKB | ChEBI)
Binding site115[4Fe-4S] cluster 2 (UniProtKB | ChEBI)
Binding site118[4Fe-4S] cluster 2 (UniProtKB | ChEBI)
Binding site121[4Fe-4S] cluster 2 (UniProtKB | ChEBI)
Binding site125[4Fe-4S] cluster 3 (UniProtKB | ChEBI)
Binding site145[4Fe-4S] cluster 3 (UniProtKB | ChEBI)
Binding site148[4Fe-4S] cluster 3 (UniProtKB | ChEBI)
Binding site151[4Fe-4S] cluster 3 (UniProtKB | ChEBI)
Binding site155[4Fe-4S] cluster 2 (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentplasma membrane
Molecular Function4 iron, 4 sulfur cluster binding
Molecular Functionelectron transfer activity
Molecular Functionmetal ion binding
Biological Processelectron transport chain

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Ion-translocating oxidoreductase complex subunit B
  • EC number
  • Alternative names
    • Rnf electron transport complex subunit B

Gene names

    • Name
      rnfB
    • ORF names
      DSY85_17900

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • MAG 103
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Gammaproteobacteria > Oceanospirillales > Oceanospirillaceae > Marinomonas

Accessions

  • Primary accession
    A0A2D6D8F5

Proteomes

Subcellular Location

Keywords

Interaction

Subunit

The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

Family & Domains

Features

Showing features for region, domain.

TypeIDPosition(s)Description
Region1-26Hydrophobic
Domain32-904Fe-4S
Domain106-1354Fe-4S ferredoxin-type
Domain136-1654Fe-4S ferredoxin-type

Sequence similarities

Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    198
  • Mass (Da)
    20,938
  • Last updated
    2018-01-31 v1
  • Checksum
    17994708CB1E6AA7
MFTVLLAIGILVALALVFGAILGYANVRFHVEGDPIVDQIDAILPQTQCGQCGHPGCRPYAEAISNGEAINRCPPGGQATVQALADLLDVEAIPLEGGEAEEPVKKVAVIREDECIGCTKCIQACPIDAILGAAKQMHTVISDECTGCDLCVEPCPVDCIDMVEVGVTSRTWSWDKPQGVGVQSAQIIATDRQTEVLH

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
QNYT01000472
EMBL· GenBank· DDBJ
RUM48335.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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