A0A286XP18 · A0A286XP18_CAVPO

Function

Features

Showing features for dna binding.

128420406080100120140160180200220240260280
TypeIDPosition(s)Description
DNA binding124-183Homeobox

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentnucleolus
Cellular Componentnucleoplasm
Cellular Componenttranscription regulator complex
Molecular Functionchromatin binding
Molecular FunctionDNA-binding transcription activator activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Biological Processaorta morphogenesis
Biological Processapoptotic process
Biological Processbranching involved in ureteric bud morphogenesis
Biological Processcochlea morphogenesis
Biological Processembryonic cranial skeleton morphogenesis
Biological Processendothelin receptor signaling pathway
Biological Processepithelial cell differentiation
Biological Processfacial nerve morphogenesis
Biological Processfungiform papilla morphogenesis
Biological Processgene expression
Biological Processmesenchymal cell proliferation involved in ureter development
Biological Processmesonephric tubule formation
Biological Processmetanephric mesenchyme development
Biological Processmiddle ear morphogenesis
Biological Processmyoblast migration
Biological Processmyoblast proliferation
Biological Processmyotome development
Biological Processnegative regulation of neuron apoptotic process
Biological Processnegative regulation of transcription by RNA polymerase II
Biological Processneural crest cell differentiation
Biological Processneuron fate specification
Biological ProcessNotch signaling pathway
Biological Processolfactory placode formation
Biological Processorgan induction
Biological Processotic vesicle development
Biological Processoutflow tract morphogenesis
Biological Processpattern specification process
Biological Processpharyngeal system development
Biological Processpositive regulation of branching involved in ureteric bud morphogenesis
Biological Processpositive regulation of brown fat cell differentiation
Biological Processpositive regulation of mesenchymal cell proliferation involved in ureter development
Biological Processpositive regulation of myoblast proliferation
Biological Processpositive regulation of secondary heart field cardioblast proliferation
Biological Processpositive regulation of ureteric bud formation
Biological Processprotein localization to nucleus
Biological Processregulation of branch elongation involved in ureteric bud branching
Biological Processregulation of epithelial cell proliferation
Biological Processregulation of neuron differentiation
Biological Processregulation of protein localization
Biological Processregulation of skeletal muscle cell differentiation
Biological Processregulation of skeletal muscle satellite cell proliferation
Biological Processregulation of synaptic assembly at neuromuscular junction
Biological Processsensory perception of sound
Biological Processskeletal muscle tissue development
Biological Processthymus development
Biological Processthyroid gland development
Biological Processtrigeminal ganglion development
Biological Processureter smooth muscle cell differentiation

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • SIX homeobox 1

Gene names

    • Name
      SIX1

Organism names

  • Taxonomic identifier
  • Strain
    • 2N
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Hystricomorpha > Caviidae > Cavia

Accessions

  • Primary accession
    A0A286XP18

Proteomes

Organism-specific databases

Subcellular Location

Keywords

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain, region, compositional bias.

TypeIDPosition(s)Description
Domain122-182Homeobox
Region168-271Disordered
Compositional bias173-192Basic and acidic residues
Compositional bias193-209Polar residues
Compositional bias217-271Polar residues

Sequence similarities

Belongs to the SIX/Sine oculis homeobox family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    284
  • Mass (Da)
    32,210
  • Last updated
    2017-11-22 v1
  • Checksum
    554C02639AE8E9EB
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENTENNNSSSNKQNQLSPLEGGKPIMSSSEEEFSPPQSPDQNSVLLLQGNMGHTRSSNYSLPGLTASQPSHGLQAHQHQLQDSLLGPLTSSLVDLGS

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias173-192Basic and acidic residues
Compositional bias193-209Polar residues
Compositional bias217-271Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AAKN02025050
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

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