A0A263NV60 · A0A263NV60_9PSED

  • Protein
    Probable 5-dehydro-4-deoxyglucarate dehydratase
  • Gene
    kdgD
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    2/5

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Pathway

Carbohydrate acid metabolism; D-glucarate degradation; 2,5-dioxopentanoate from D-glucarate: step 2/2.

Features

Showing features for binding site, active site.

130320406080100120140160180200220240260280300
TypeIDPosition(s)Description
Binding site54pyruvate (UniProtKB | ChEBI)
Active site141Proton donor/acceptor
Active site167Schiff-base intermediate with substrate

GO annotations

AspectTerm
Molecular Function4-hydroxy-tetrahydrodipicolinate synthase activity
Molecular Function5-dehydro-4-deoxyglucarate dehydratase activity
Biological ProcessD-glucarate catabolic process

Keywords

  • Molecular function

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Probable 5-dehydro-4-deoxyglucarate dehydratase
  • EC number
  • Alternative names
    • 5-keto-4-deoxy-glucarate dehydratase
      (KDGDH
      )

Gene names

    • Name
      kdgD
    • ORF names
      B7453_10120

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • IB20
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Accessions

  • Primary accession
    A0A263NV60

Proteomes

Family & Domains

Sequence similarities

Belongs to the DapA family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    303
  • Mass (Da)
    32,635
  • Last updated
    2017-12-20 v1
  • Checksum
    2F64F41CF0796B3A
MNPQELKSILSHGLLSFPVTDFNAQGDFHQAGYIKRLEWLAPYGATALFAAGGTGEFFSLAASEYSQVVKTAVDTCATSVPILAGVGGSTRQAIEYAQEAERLGAKGLLLLPHYLTEASQDGVAAHVEAVCKSVKIGVVVYNRNVCRLTAPLLERLAERCPNLIGYKDGLGDIELMVSIRRRLGDRFSYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYHAIAKDDHATVGKIIDNFFLPYLDIRNRKAGYAVSIVKAGAKIAGYDAGPVRTPLTDLLPEEYEALAALIDKQGPQ

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
NMRE01000018
EMBL· GenBank· DDBJ
OZO04631.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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