A0A1Y3DYD9 · A0A1Y3DYD9_PLAKN

  • Protein
    Putative Exodeoxyribonuclease III
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    2/5

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Cofactor

Mg2+ (UniProtKB | Rhea| CHEBI:18420 )

Mn2+ (UniProtKB | Rhea| CHEBI:29035 )

Note: Probably binds two magnesium or manganese ions per subunit.

Features

Showing features for binding site, site.

1900100200300400500600700800900
TypeIDPosition(s)Description
Binding site10Mg2+ 1 (UniProtKB | ChEBI)
Binding site44Mg2+ 1 (UniProtKB | ChEBI)
Binding site240Mg2+ 1 (UniProtKB | ChEBI)
Binding site242Mg2+ 1 (UniProtKB | ChEBI)
Site242Transition state stabilizer

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular Functionmetal ion binding
Molecular Functionnuclease activity
Biological ProcessDNA repair

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Putative Exodeoxyribonuclease III

Gene names

    • ORF names
      PKNOH_S05372700

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • Malayan Strain Pk1 (A+)
  • Taxonomic lineage
    Eukaryota > Sar > Alveolata > Apicomplexa > Aconoidasida > Haemosporida > Plasmodiidae > Plasmodium > Plasmodium (Plasmodium)

Accessions

  • Primary accession
    A0A1Y3DYD9

Proteomes

Organism-specific databases

Family & Domains

Features

Showing features for domain, region, compositional bias.

TypeIDPosition(s)Description
Domain7-254Endonuclease/exonuclease/phosphatase
Region367-480Disordered
Compositional bias370-392Basic and acidic residues
Compositional bias408-454Acidic residues
Compositional bias455-480Basic and acidic residues
Compositional bias676-711Basic and acidic residues
Region676-726Disordered

Sequence similarities

Belongs to the DNA repair enzymes AP/ExoA family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    900
  • Mass (Da)
    102,319
  • Last updated
    2017-08-30 v1
  • Checksum
    8F8810425776B04F
MESLQIASWNVNGWKKSCELIKQREVTVAHFLKKLNIDILCLQETKTNNPTIENESSLLDAYSDEYESYWTCCKRRGGGEKIQRGYSGLATYVGNKAKIICCCSDPFRNFFFSVDGFSEEDLLVSRCFPRDNSSVSFYAFPHDSGEVTDALSSGYGEQKCQTPRQIQPPDAPLQRVSDMFNEGRVLITIHKEFVLVNVYAPYSGCNYNRLDYKMRFLHAVRSKLLELRITTGLPIILVGDLNISFRNRDVHYLNNVINLHEVQKDMNKVNIREDLKQRICKQIPIIIETLSSRDNFIIKKQKGENGESFRLYLNFKGDVKRVGTSFTSMEEIFFFFSLDPVFVEDKYAGVYPNDFFFFLRAPGGGIQRGDDKGGDNKDGDNKYGDNKYGDNKYGDNKYGGIQRGEDEGGDDEGGDDEGGDDEGGDDEGGDDEGGDDEGGDDEGGDDEGGDDEGGDDEGIVHSGEDPPKRSETHHGNHVERDMYDSFAKEREKICSHFMKKEYAPIQEYLLRMEEKNVKYNIRRITTHGECRRILCRYSFRNCIEGKYNVKKANTLYLKHFNDILLSLGTFLSKEDLLKVANALGYSSSPECCTNFVKNLICEDRMVDTFSFFYPSLNGKFTCWDTYKQHRVSNEGSRIDYIFVDFILYERLIRSHSHLYASPVVMTEELRALLRREGDAKGEGDAKGEGDAKGEGDTKGEGRDEANNGIVMDDDSSKKGVNSANTDTGDPCEENYLCVNSPQNNCNYANYFNRLRKKRGRNPPEEEWVSEQEEDIYHFQFKLRSYIGFIYTSPRLSDHIAVNCTFMARTQSGGTKKRKEVPICFSGEPTIPLRSFCSSEKQYVTFFPIYLIDPALFSGYTFEILNPVHAHGGTCPSITMAQPHKKTSKITQYFSVRRGKP

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias370-392Basic and acidic residues
Compositional bias408-454Acidic residues
Compositional bias455-480Basic and acidic residues
Compositional bias676-711Basic and acidic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
NETL01000019
EMBL· GenBank· DDBJ
OTN67797.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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