A0A1X9IDI1 · A0A1X9IDI1_9PEZI
- ProteinDNA-directed RNA polymerase
- GeneRpb2
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids199 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | RNA polymerase II, core complex | |
Molecular Function | DNA binding | |
Molecular Function | ribonucleoside binding | |
Molecular Function | RNA polymerase II activity |
Keywords
- Molecular function
- Biological process
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameDNA-directed RNA polymerase
- EC number
Gene names
Organism names
- Organism
- Strains
- Taxonomic lineageEukaryota > Fungi > Dikarya > Ascomycota > Pezizomycotina > Dothideomycetes > Dothideomycetes incertae sedis > Botryosphaeriales > Botryosphaeriaceae > Lasiodiplodia
Accessions
- Primary accessionA0A1X9IDI1
Subcellular Location
UniProt Annotation
GO Annotation
Keywords
- Cellular component
Structure
Family & Domains
Features
Showing features for domain, compositional bias, region.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 15-76 | RNA polymerase Rpb2 | ||||
Sequence: IFINGVWVGVHRDPTQLVSVVKKLRRDGTLSPEMSLIRDVRDREFKIFTDAGRVCRPLFIID | ||||||
Domain | 120-195 | RNA polymerase Rpb2 | ||||
Sequence: WQGLLHSGVVEYMDAEEEEVAMIVMTPDDLRAHHRARQGIIDEDDEETKRNRDPHERVVPPPNPSVKQYTHCEIHP | ||||||
Compositional bias | 156-176 | Basic and acidic residues | ||||
Sequence: RQGIIDEDDEETKRNRDPHER | ||||||
Region | 156-186 | Disordered | ||||
Sequence: RQGIIDEDDEETKRNRDPHERVVPPPNPSVK |
Sequence similarities
Belongs to the RNA polymerase beta chain family.
Family and domain databases
Sequence
- Sequence statusFragment
- Length199
- Mass (Da)22,955
- Last updated2017-08-30 v1
- Checksum300AF555DEE5CDCD
Features
Showing features for non-terminal residue, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Non-terminal residue | 1 | |||||
Sequence: L | ||||||
Compositional bias | 156-176 | Basic and acidic residues | ||||
Sequence: RQGIIDEDDEETKRNRDPHER | ||||||
Non-terminal residue | 199 | |||||
Sequence: L |
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
KX499948 EMBL· GenBank· DDBJ | AOO34519.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
KX499952 EMBL· GenBank· DDBJ | AOO34523.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
KX499953 EMBL· GenBank· DDBJ | AOO34524.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
KX499961 EMBL· GenBank· DDBJ | AOO34532.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
KX499963 EMBL· GenBank· DDBJ | AOO34534.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
KX499969 EMBL· GenBank· DDBJ | AOO34540.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
KX499972 EMBL· GenBank· DDBJ | AOO34543.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
KX499977 EMBL· GenBank· DDBJ | AOO34548.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318296 EMBL· GenBank· DDBJ | QJS47340.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318297 EMBL· GenBank· DDBJ | QJS47341.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318298 EMBL· GenBank· DDBJ | QJS47342.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318299 EMBL· GenBank· DDBJ | QJS47343.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318300 EMBL· GenBank· DDBJ | QJS47344.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318301 EMBL· GenBank· DDBJ | QJS47345.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318302 EMBL· GenBank· DDBJ | QJS47346.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318303 EMBL· GenBank· DDBJ | QJS47347.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318304 EMBL· GenBank· DDBJ | QJS47348.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318305 EMBL· GenBank· DDBJ | QJS47349.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
MT318306 EMBL· GenBank· DDBJ | QJS47350.1 EMBL· GenBank· DDBJ | Genomic DNA |