A0A1X0Y3H1 · A0A1X0Y3H1_9BACT

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis.

Features

Showing features for active site.

128820406080100120140160180200220240260280
TypeIDPosition(s)Description
Active site192Proton donor/acceptor
Active site208Nucleophile

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentextracellular region
Molecular Functionpeptidoglycan L,D-transpeptidase activity
Molecular Functiontransferase activity
Biological Processcell wall organization
Biological Processpeptidoglycan-protein cross-linking
Biological Processregulation of cell shape

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Submitted names
    • Peptidoglycan L,D-transpeptidase

Gene names

    • ORF names
      B5V00_09955

Organism names

  • Taxonomic identifier
  • Strain
    • EPR-M
  • Taxonomic lineage
    Bacteria > Thermodesulfobacteriota > Desulfuromonadia > Desulfuromonadales > Geothermobacteraceae > Geothermobacter

Accessions

  • Primary accession
    A0A1X0Y3H1

Proteomes

Subcellular Location

PTM/Processing

Features

Showing features for signal, chain.

TypeIDPosition(s)Description
Signal1-20
ChainPRO_501241672521-288

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain43-87LysM
Domain99-232L,D-TPase catalytic

Sequence similarities

Belongs to the YkuD family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    288
  • Mass (Da)
    31,793
  • Last updated
    2017-07-05 v1
  • Checksum
    90E8B52BC3AA0924
MRRLLPALFLILAGVSTASAWSPVRYAESLLTDGSPAVIGHNRDYVVGSNETLMEIAVKTGVGFDNLCRANPDSDPWHPQVGSRLILPLAFLPPDDLITGITINLAEMRLYLVWSEDGQRRIRAYPLGIGRDGWETPPGDFRVTRILRHPSWTPPPSLRKEKPDLPAVIPPGPDNPLGEFWIGTSAPGIGLHGTNQPFGVGRRVSHGCLRLYPRDIRDLVTRVKPGMPLRILNQPVKISVRASNLYLESHAPPLNPEPLPATVPMDRMDIHRAILAARGIPLRFSIQN

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
NAAD01000011
EMBL· GenBank· DDBJ
ORJ59612.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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